Methylorubrum extorquens DM4: METDI2013
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Entry
METDI2013 CDS
T00947
Name
(GenBank) transcriptional regulator, DeoR family
KO
K02444
DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdi03000
]
METDI2013
Transcription factors [BR:
mdi03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
METDI2013
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Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_12
GntR
HTH_20
HTH_24
HTH_5
MarR
HTH_PafC
HTH_IclR
CggR_N
HTH_36
HTH_Crp_2
Rrf2
FaeA
TrmB
HTH_AsnC-type
RuvB_C
DUF2250
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
CAX23601
UniProt:
C7CJW1
LinkDB
All DBs
Position
complement(1882644..1883396)
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AA seq
250 aa
AA seq
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MLTDHRHEEILSQLAQTGRVGVTSIAATLAVSDETIRRDLKMLEERGLLRRIHGGAVRPR
LDQERPLTERSGLNSREKGRVAALAEGLVEDGMSIFIDTGTTTLALARRLTTRKLTVTTN
SIDLALLLADSPARVNLTPGRLRPNDNALVGYDTVDYARRHFFDLAIMGIAACDLAQGWM
DYEDHESVLRQALRGQTRRAVLLADSRKFGRQANLQTFDLAAPLTVVTDRPPPEPFAERF
SRHDIDLICG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgatcatcgccacgaggaaattctctcgcagcttgcgcagacggggcgcgtc
ggcgtcaccagcatcgccgccaccctcgcggtctccgacgagacgatccggcgcgacctg
aaaatgctggaggagcgcgggctgctgcggcgcatccacggcggcgccgtgcggccgcgc
ctcgatcaggagcgcccgctcaccgagcgcagcgggctcaacagccgcgagaagggccgc
gtcgccgcactggccgaggggctggtggaggacgggatgtcgatcttcatcgacaccggc
accaccacgctggccctggcccggcggctcaccacccgcaagctcacggtgacgacgaac
tcgatcgatctcgcgctgctgctggccgacagcccggcacgggtgaacctgacgccgggc
cgactacgcccgaacgacaacgcgctggtcggctacgacaccgtggactacgcccggcgc
cacttcttcgacctcgcgatcatgggcatcgccgcctgcgacctcgcgcagggctggatg
gactacgaggaccacgaatccgtcctgcgccaggcgttgcggggccagacccggcgggcg
gtgctgctcgccgattcccgcaagttcgggcgccaggccaacctccagaccttcgatctg
gccgcgccgctcaccgtggtgaccgaccggccgccgcccgagcccttcgccgagcgtttc
agccggcacgacatcgacctgatctgcggctga
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