Methylorubrum extorquens DM4: METDI2054
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Entry
METDI2054 CDS
T00947
Symbol
pbpC
Name
(GenBank) penicillin binding protein
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00550
Peptidoglycan biosynthesis
mdi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
METDI2054 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mdi01003
]
METDI2054 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mdi01011
]
METDI2054 (pbpC)
Enzymes [BR:
mdi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
METDI2054 (pbpC)
Glycosyltransferases [BR:
mdi01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
METDI2054 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
mdi01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
METDI2054 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
CAX23636
UniProt:
C7CKT4
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All DBs
Position
1939123..1941324
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AA seq
733 aa
AA seq
DB search
MSTDTACPPPSAGEGACGAGGRGGDVSGKGAPLSRPASRATLPRRGGRVLLALIFTAAFL
LAGALWRYATTLPPLDLTQASLRSTVILDRKGQLLRPFATTDGRWRLPVTAGAIDPRYLA
MLKAYEDRSFDSHPGIDPAATLRAAWQWLAHGKIVSGGSTLSMQVARLVEPRAERSLPAK
LRQMVRAVALERTLGKSGVLDLYLALAPYGGPVEGVRAASLAYFGREPARLSFAESALLV
ALPQAPEARRPDRFAANARRARDRVLDIAAERGVLTAAEAQAAKAEPVPVARKQFPMLAA
HAAEQAHAADPDARVQHLTLDARLQASLEALATERAAAAGPALSAAILAIDNRTGAVLAH
VGSAGYLDAARAGAVDATQAVRSPGSALKPFIYALAFEDGLAHPETLLDDRPARFAASYA
PENFDMGFRGTVTARVALQQSLNLPAVELLDAVGAARFVARLRGAGATILLPRDTAPGLP
VALGGLGITLTDLARLYAGLARSGTVPALARRLDGPPAAPEPERRVADPVAAWYVADTLR
GAPPPENALPGRISFKTGTSYGYRDAWAVGFDARVTIAVWIGRPDGASVPGLVGRSHAAP
ILFDAFARLGGEPEALPRPRDALVATTAALPPPLRHIRRDAPKTFAATLGVPLKIAYPPD
GARVDLGLGEGAQARLALKALGGQPPLTWMVDGLPVAEAMRRQSEWSPEGAGFARISVMD
AAGASDSVVVRLE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgacactgcctgccctcccccctctgcgggggagggtgcctgcggagcaggc
gggagagggggcgacgtgtccggaaagggcgctcccctctcccgacccgcttcgcgggcc
accctcccccgcagaggggggagggttcttctcgctcttatctttaccgccgcgtttctc
ctggccggcgctctctggcgctacgccacgaccctcccgcccctggacctgacccaggcc
tcgctccgctccaccgtcatcctcgaccggaagggccagctgctgcgccccttcgccacc
accgacgggcgctggcggctgcccgtcaccgcgggcgcgatcgatccgcgatacctcgcc
atgctcaaggcctatgaggaccgcagcttcgacagccatcccggcatcgatccggcggcg
acgctccgcgccgcgtggcaatggctcgcccatggaaaaatcgtgtcgggcggctcgacg
ctgtcgatgcaggtggcccgcctcgtcgagccgcgggccgagcgctcgctccccgcaaag
ctccggcagatggtccgtgcggtcgcgctggagcggaccctcggcaaatccggtgtgctc
gacctctacctcgcgctcgccccctatggcggcccggtcgagggcgtgcgggcggcgagt
ctggcctatttcggtcgcgagccggcccgcctgtcgtttgccgagagcgcgctcctcgtc
gccctgccgcaggctccggaggcccgccggcccgaccgcttcgccgccaacgcgcggcgc
gcccgcgaccgggtgctcgacatcgccgccgagcgcggcgtgctgaccgccgccgaagcg
caggccgccaaggcggagccggtgccggttgcgcgaaaacaattcccgatgcttgccgcc
cacgccgccgagcaggcccacgccgccgatccggacgcgcgggtgcagcatctgacgctc
gacgcgcgccttcaggcgagcctcgaggcgctggcgaccgagcgcgcggcggccgccggc
ccggcgctctccgccgcgatcctcgccatcgacaaccgaaccggcgcggtgctcgcccat
gtcggcagcgccggctatctcgatgcggcccgcgcgggcgccgtcgatgccacgcaggca
gtgcgctcgccgggctcggcgcttaagccgttcatctacgcgctcgccttcgaggacggg
ctcgcccacccggaaacactcctcgacgaccgcccggcgcgctttgccgccagctacgcc
ccggaaaacttcgacatggggtttcgcggcacggtgacggcgcgggtcgcacttcagcaa
tcgctgaacctgcccgcggtcgagcttctggatgcggtcggcgccgcccgtttcgtcgcg
cggctgcggggcgccggcgcgacgatcctgctgccgcgcgacacggcgccgggtttgccc
gtggcgctcggcgggctcggcatcacgctcaccgacctcgcccggctctatgcgggactc
gcccgctccggcaccgtaccggcgctggcccggcgcctcgacggtccgccggccgcgccc
gagccggagcggcgggtcgccgatccggtcgcggcctggtacgtcgccgataccttgcgc
ggcgccccgccgccggagaacgccctgcccggccggatcagcttcaagaccggcacctcc
tacggctaccgcgacgcctgggcggtggggttcgacgcccgcgtcacgattgccgtctgg
atcggccgccccgacggcgcctcggtgccgggcctggttgggcgcagccacgccgccccg
atcctgttcgacgccttcgcccgcctcggcggcgagccggaagccctgccccggccccgc
gatgccctcgtcgccaccaccgccgccctgccgccgcccctgcgccacatccgccgcgac
gccccgaaaaccttcgcggcgacgctcggcgtgccgctcaagatcgcctacccgccggac
ggtgcccgggtcgatctcggtcttggtgagggcgcgcaggcccgcctcgccctcaaggcc
ctgggcggccagccgccgctgacctggatggtcgacggcctgccggtggccgaggcaatg
cgccggcaatcggagtggagcccggagggcgccggtttcgctcggatctcggtgatggac
gcggcaggcgcgagcgacagcgtggtggttcggctggaatag
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