Methylorubrum extorquens DM4: METDI2118
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Entry
METDI2118 CDS
T00947
Name
(GenBank) putative transcriptional regulator (AraC family)
KO
K07506
AraC family transcriptional regulator
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdi03000
]
METDI2118
Transcription factors [BR:
mdi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
METDI2118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
CAX23719
UniProt:
C7CKZ8
LinkDB
All DBs
Position
2000410..2001219
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AA seq
269 aa
AA seq
DB search
MRSGTIGRGLSLAEWSNRDNQARYDRPDHHTLSIYLDGGERVVREDRRLSGGGPDKLCLL
PAGHESRWHIGGSLRMFHLYIEPDVLAYRALTAFDVDPRRINVQDLTFSDDPAMAMIVRG
GVMPLDWTEGGDGPALDAACHLLVHRLLRQYAKTAGPAPVRGGLSPTTRRRIAALIEAHL
DEPLTLDRLAAEARLSTFHFAKMFRVSFGMPPHRYLGARRIERAKQLLRGEPDGLAEVAL
ACGYASQSHFTRVFKTATQMTPGEWKKRS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcgggaacgatcgggcgtgggctctcgctcgccgagtggagcaaccgcgacaac
caagcccgttacgatcggcccgatcaccacacgctcagcatctatctcgacgggggcgag
cgcgtcgtgcgcgaagaccggcggttgtcgggcggggggccggacaagctctgcctcttg
cccgccggacacgagagccgctggcacatcggcggatcgctccggatgttccacctctat
atcgagcctgacgtgctcgcctatcgggcgttgacggccttcgacgtcgatccgcgtcgg
atcaacgttcaagacctgaccttctccgacgatcccgcgatggcgatgatcgttcgcggt
ggcgtgatgccgctcgactggacggagggaggcgatggcccggcgctggatgccgcctgc
cacctcctcgttcaccgcctcctacggcaatacgccaagaccgcggggccggcgcccgtc
cgcggtggcctgtcgcccacgacgcggcgacggatcgcagcgttgatcgaagcgcatctc
gacgagccgctgacgctcgatcgattggccgcggaagctcgtctcagcacgttccacttc
gccaagatgtttcgagtgagcttcggcatgcccccgcatcgctatctcggcgcacggcgc
atcgagcgggcaaaacagctcttgagaggggaaccggacggactggccgaagtggcgctg
gcctgcggctatgcctcgcagagccacttcacgcgcgtcttcaagacagcgacccagatg
acgcccggcgaatggaaaaagcgatcgtga
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