Methylorubrum extorquens DM4: METDI2148
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Entry
METDI2148 CDS
T00947
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi03030
DNA replication
mdi03430
Mismatch repair
mdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
METDI2148 (dnaQ)
03430 Mismatch repair
METDI2148 (dnaQ)
03440 Homologous recombination
METDI2148 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdi03032
]
METDI2148 (dnaQ)
03400 DNA repair and recombination proteins [BR:
mdi03400
]
METDI2148 (dnaQ)
Enzymes [BR:
mdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
METDI2148 (dnaQ)
DNA replication proteins [BR:
mdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
METDI2148 (dnaQ)
DNA repair and recombination proteins [BR:
mdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
METDI2148 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAX23749
UniProt:
C7CL28
LinkDB
All DBs
Position
complement(2034408..2035118)
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AA seq
236 aa
AA seq
DB search
MLREIVLDTETTGTEARNGDRLIEIGCVELINHVQTGETFHRLINPQRAVSEGAFAVHGI
SDAMLADKPVFAEVVDAFLEFCGDARLVIHNAPFDVGFLNMEFARLGPAAPKAIALEDVV
DTLLLARRKHPGAANNLDALCNRYGVDTTRRVKHGALLDAQILAEVYVELLGGKQTSLGL
SIAEPAETVTLGALTDSGPVGPRPMRSRLTEGERLRHDSFVESLGTNAVWREYMEP
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcgagatcgtcctcgataccgagaccaccggcacggaggctcgaaacggcgac
cggctgatcgagatcggctgcgtcgaactcatcaaccacgtccagaccggcgagaccttc
caccggctcatcaacccgcagcgggcggtgtccgaaggggcattcgcggtgcacggcatc
tcggatgcgatgctcgccgacaagccggtcttcgccgaggtggtcgacgccttcctcgaa
ttctgcggcgatgcgcggctggtgatccacaacgcgcccttcgacgtcggcttcctcaac
atggagttcgcccggctcgggcccgccgcgccgaaggcgatcgcgctggaggacgtggtc
gataccctgctgctcgcccgccgcaagcatccgggcgcggccaacaacctcgatgccctg
tgcaaccgctacggcgtggacaccacccgccgcgtcaagcacggcgcactgctcgacgcg
cagatcctggccgaggtctatgtcgagttgctcggcggcaagcagaccagcttggggctc
agcatcgccgagccggccgagaccgtgacgctcggggccttgactgattcgggtccggtc
ggcccgcggccaatgcgcagccgtctaaccgaaggcgagcgcttgcggcatgacagcttt
gtcgagagcctcggaacaaacgccgtctggcgggaatacatggaaccgtga
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