Methylorubrum extorquens DM4: METDI2245
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Entry
METDI2245 CDS
T00947
Symbol
trmE
Name
(GenBank) tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdi03016
]
METDI2245 (trmE)
Transfer RNA biogenesis [BR:
mdi03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
METDI2245 (trmE)
Prokaryotic type
Methyltransferases
METDI2245 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AAA_29
RsgA_GTPase
AAA_28
ABC_tran
HflX_C
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CAX23846
UniProt:
C7CCM2
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All DBs
Position
2132305..2133639
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AA seq
444 aa
AA seq
DB search
MPPPLPDRDDTIFAPASGFGRAAVTVVRISGPAAGLALDRLAGGRPEPRRLSLRRLRDPD
SRDILDQALVAWLPGPATATGEDMAELHLHGGLAVRSAVLRALAGVPGCRPAEAGAFSRR
AFLNGRIDLTEAEGIADLIDAETEAQRVQALRQLDGALGRQVAAWRETGIDLLAGAEAAL
DFADEGDVDEDGLDAALSGRATALRDAIRAALADGRRGERLREGFCVVLAGAPNAGKSTL
LNALSGRDAAIVSDIPGTTRDAIEVRCDLGGLPVVLVDTAGLRETADAIEAEGVKRTQSR
IRSADLVLHLVPAGGKADAELFTDISILLVRTKTDLAPEVPGEGGLAISAVTGAGLDALL
DAIQAAAQTALGQGDALVTRERHREALSRAAAHLDRVATASAGFPPELVAEDLRLAVRAL
GEVGGHVGVEEMLDRLFAGFCIGK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcccccaccccttcccgaccgcgacgacaccatcttcgccccggcgagcggcttcggc
cgtgcggcggtgacggtggtgcgcatcagcgggccggcggcggggcttgcgctcgaccgg
ctggccggcgggcgcccggagccgcgccgtctctccctgcgccgcctgcgcgaccctgac
tcccgcgacatcctcgatcaggccctcgtggcgtggctgccggggcctgccaccgccacc
ggcgaggacatggccgagctgcacctgcatgggggcctcgccgtgcggtccgccgtgctg
cgggcgctcgcaggcgtgccgggttgccggccggcggaagccggggcgttcagccgccgc
gccttcctcaacggccgcatcgacctcaccgaggcggaggggatcgccgacctcatcgac
gccgagaccgaagcgcagcgtgtccaggccctgcgtcagctcgacggtgccctcggccgc
caggtcgcggcatggcgcgagaccggcatcgatctgctcgccggagcggaggcggccctc
gattttgccgatgaaggcgatgtcgatgaggacggcctcgatgccgccctgtccggccgc
gccaccgccttgcgcgatgcgatccgagccgcactggccgacggacgccggggcgagcgc
ctgcgcgaggggttctgcgtcgtgctggcgggcgctcccaatgccggaaaatcgaccctg
ctcaatgcgctgagcgggcgcgacgcggccatcgtttccgacattcccggcacgacccgc
gatgccatcgaggtgcgctgcgatctcggcgggttgccggtcgtattggtcgataccgcg
ggcctgcgcgagacggcggatgcgatcgaggcggagggcgtcaagcgcacgcaaagccgg
atccgtagcgccgacctcgtgctccatctcgtgccggcgggcggcaaggccgacgccgag
ctttttactgacatctccatccttctcgttcgcacgaaaaccgacctcgcgccggaggtg
ccgggggagggcggcctcgccatctccgccgtcacgggtgctgggctcgacgcgctgttg
gatgcgattcaggccgcggcccaaaccgccctcggtcagggcgatgccctcgtcacccgt
gagcgtcatcgcgaggctttgtcccgggccgcggcgcatctcgaccgcgtcgccaccgca
tcggccggcttcccgccggaactggtggcggaggacctccggctcgccgtccgggcgctg
ggcgaggtcggggggcatgtcggcgtcgaggagatgctggaccgcctcttcgccggcttc
tgcatcggcaaataa
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