Methylorubrum extorquens DM4: METDI2302
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Entry
METDI2302 CDS
T00947
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A (tRNA-uridine isomerase I) (tRNA pseudouridylate synthase I)
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdi03016
]
METDI2302 (truA)
Enzymes [BR:
mdi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
METDI2302 (truA)
Transfer RNA biogenesis [BR:
mdi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
METDI2302 (truA)
Prokaryotic type
METDI2302 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
CAX23904
UniProt:
C7CF80
LinkDB
All DBs
Position
complement(2192359..2193111)
Genome browser
AA seq
250 aa
AA seq
DB search
MPRYKLVIEYDGAPFRGWQRQADDPTVQAAIETAVTRFSGETARLTCAGRTDAGVHAIHQ
VAHLDLAKDWRTDTVRDALNAHLRPQPVAILSAEVVPQEFDARHSAIRRHYRYRILNRRS
PAALTRAHVWQVPWPLDAELMHRAAQRLLGHHDFSAFRAAECQAKSPMRTLEQLDVTRVR
MGLFEEIVIATSARSFLHHQVRAMAGTLMLAGCNRLSADDVAEILATGAKHRCGPLAPAC
GLTFVGVDYA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgccccgctacaagctcgtcatcgagtacgacggcgcgccgttccgcggctggcagcgt
caggccgacgacccgaccgtgcaggccgccatcgagaccgccgtgacgcgcttctccggc
gagacggcgcggctcacctgcgccggtcgcaccgatgccggcgtgcacgcaatccatcag
gtcgcccatctcgaccttgcgaaggattggcgcaccgacaccgtgcgcgacgcgctgaac
gcgcatctgcggccgcagcccgtcgccatcctctccgccgaggtggtgccacaggagttc
gacgcgcgacactcggcgatccggcggcactaccgctaccgcatcctcaaccggcgcagc
cccgccgcgctcacccgcgcccatgtctggcaggtgccctggccgctcgatgccgagctg
atgcatagggcggcgcaacggctcctcggccaccacgatttctcggcgttccgcgccgcc
gagtgccaggcaaagtcgcccatgcgcacgctggaacagctcgacgtgacccgcgtgcgg
atgggcctgttcgaggagatcgtgatcgcgacctcggcgcgctcgttcctgcaccatcag
gtgcgcgccatggccggcacgctgatgctcgccggctgcaaccgcctctccgccgacgac
gtggcggagatcctggcgacaggggccaagcaccgctgcgggccgctggcgccggcctgc
gggctgaccttcgtcggcgtggattatgcttaa
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