Methylorubrum extorquens DM4: METDI2313
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Entry
METDI2313 CDS
T00947
Symbol
sucD
Name
(GenBank) succinyl-CoA synthetase, alpha subunit
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00020
Citrate cycle (TCA cycle)
mdi00640
Propanoate metabolism
mdi00660
C5-Branched dibasic acid metabolism
mdi00720
Other carbon fixation pathways
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
mdi01120
Microbial metabolism in diverse environments
mdi01200
Carbon metabolism
Module
mdi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mdi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
METDI2313 (sucD)
00640 Propanoate metabolism
METDI2313 (sucD)
00660 C5-Branched dibasic acid metabolism
METDI2313 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
METDI2313 (sucD)
Enzymes [BR:
mdi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
METDI2313 (sucD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
CAX23915
UniProt:
C7CG21
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All DBs
Position
2205548..2206435
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AA seq
295 aa
AA seq
DB search
MSILIDQNTKVICQGFTGKNGTFHSEQAIAYGTKMVGGTSPGKGGSTHLGLPVFDTVAEA
RDATGADASVVYVPPPGAADAICEAIQAEIPLIVCITEGIPVLDMVRVKRALEGSKSRLI
GPNCPGVVTAGQSKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTVEGLGQTTAVGIGG
DPVKGTEFIAMLELFLADPKTESIVMIGEIGGSAEEEAAQFLADEAKRGRKKPMVGFIAG
RTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPARLGSTLVDVLKSR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctcatcgaccagaacaccaaggtcatctgccagggctttaccggcaagaac
ggcaccttccactccgagcaggccatcgcctacggcaccaagatggtcggcggcacgagc
cccggtaagggcggctccacccatctcggcctgccggtgttcgacaccgtggccgaggcg
cgcgatgccaccggcgccgatgcctcggtcgtctacgtgccgccgccgggcgccgccgat
gcgatctgcgaggcgatccaggcggagattccgctcatcgtctgcatcaccgagggcatt
ccggtgctcgacatggtgcgggtcaagcgcgcgctcgaaggctcgaagtcgcgcctgatc
gggccgaactgccccggcgtcgtcaccgcgggccagtcgaagatcggcatcatgccggcc
aacatcttcaagccgggctcggtcggcatcgtctcgcgctccggcaccctgacctacgag
gcggtgttccagaccaccgtcgaggggctcggccagaccaccgccgttggcatcggcggc
gatccggtcaagggcaccgagttcatcgccatgctggagctgttcctggccgatcccaag
accgagtcgatcgtgatgatcggcgagatcggcggctcggccgaggaagaggcggcacag
ttcctggccgacgaggccaagcgggggcgcaagaagccgatggttggcttcatcgccggt
cgcaccgcgcctcccggccgccgcatgggccatgccggcgcgatcatctccggcggcaag
ggcggcgccgaggacaagattgcagcgatggaggccgcgggcatccgcgtctcgccttcg
ccagcccgtctcggctccacgctcgtggacgtgctgaagtccaggtga
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