Methylorubrum extorquens DM4: METDI2413
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Entry
METDI2413 CDS
T00947
Name
(GenBank) putative transcriptional regulator, TetR/AcrR family
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdi03000
]
METDI2413
Transcription factors [BR:
mdi03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
METDI2413
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TetR_C_24
Motif
Other DBs
NCBI-ProteinID:
CAX24020
LinkDB
All DBs
Position
complement(2333449..2334231)
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AA seq
260 aa
AA seq
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MRTGECLRPRGEDRRARPAVPAIGRARRIGYVIREPRGGGDGSGVSGVVGSEIGAPARRQ
RRDGALRREAVLDAGLEIFSTVGLHGASLDQIALRAGLSKTNLLYYFRTKEDLYVAVLRR
VLDVWLDPLHALDAESEPAEALKRYIRSKITLSRDAPRASRLFCLEIVQGAPLLRAELEG
PLRDLVEAKAAVLRGWIADGRIAPHDPRHLVFAIWAVTQHYADFAVQVEAITGRDLSDEA
FFEQTVESTQRLILASLGLT
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcacgggtgagtgtcttcgaccgcgcggggaggaccggcgcgcacgccccgcggtg
ccggcgattggtcgcgcgcgccggatcggatacgtgatccgagagccgcgcgggggcggt
gacggatcgggagtctcgggcgtggtcggaagcgagatcggggccccggcgcgccgacaa
cgacgcgacggtgccctgcgccgggaagccgtgctcgatgccggcctggagatcttctcg
accgtcggcctgcacggcgccagcctcgaccagatcgccctgcgcgccgggctctcgaag
acgaacctgctctactacttccgcaccaaggaagacctctacgtcgccgtgctgcggcgc
gtgctcgatgtctggctcgacccgctccatgcgctcgacgcggaatccgagccggccgag
gcgctcaagcgctacatccgctcgaagatcaccctgtcgcgggacgcgccgcgggcctcg
cggctgttctgcctggagatcgtgcagggcgcgccgctcctgcgcgccgaactcgaaggc
cccctgcgggacttggtcgaggccaaggccgcggtgctgcgcggctggatcgccgacggg
cgcatcgccccgcacgatccccgccacctcgtcttcgcgatctgggccgtcacccagcac
tatgccgacttcgcggtgcaggtggaggccatcaccgggcgcgatctcagcgacgaggcc
ttcttcgagcagacggtcgagagcacccagagattgatcctggcgagcctcggactgacc
tga
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