Methylorubrum extorquens DM4: METDI2576
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Entry
METDI2576 CDS
T00947
Name
(GenBank) putative DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
METDI2576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdi03400
]
METDI2576
DNA repair and recombination proteins [BR:
mdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
METDI2576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
AAA_22
AAA_14
Motif
Other DBs
NCBI-ProteinID:
CAX24229
UniProt:
C7CAU6
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Position
2484648..2486183
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AA seq
511 aa
AA seq
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MGFKSILYPRGGAPDLPETVPPPDCFPDLNLDLIVASATAGRDEYNLQPFYHSPPTDVET
VHYRHEVMRDLEQDVIMGFVKAFSAKMRSMREQIATLGKLYYRFQKEAVFLDAIAFYCDA
VSQLGKDLEAADLRSTGLLALRDHVRSYAQSASFSTLQRTMREIKRDLSRIEYSMLIRYT
SVTVRKLGSEPDYSAAVQDTFDQFKQGAVKDYDFKLQDFFEINHIGAGILDFIARLYPSV
FANLDRFFVDNQGYLEPTIGRWDREIQFYISYLDYIRPLQRGGLRFCYPALSSTSKAVKN
KRTFDLALARKLVESSAPVVTNDFELNERERILVVSGPNQGGKTTFARTFGQLHYLGRLG
CPVPGTDARLFFYDKLLTHFEKEEDIHNHRGKLEDDLVRIHDVLRQATSNSIVILNEIFT
STTLRDALFLGRRVLERLIELDLLCVCVTFMDELSSLGPQTVSLVSTVVPDNPAERTFRV
VRRTADGRSYAMSIAEKYRVTYDSLKERLAS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcaagagcatcctctacccgcgaggtggtgcaccggaccttcctgagacggtg
cccccgccagattgctttcccgatttaaatttggatctcatcgtggcttcggcaaccgct
ggccgcgacgaatacaatcttcaaccattctatcattcacccccgacggacgtcgagacg
gtccattatcgccacgaggtgatgagagacctcgagcaagatgtcattatgggtttcgtg
aaggcgttttcggcgaagatgcgatcgatgcgcgagcagatcgccaccctcggcaaactt
tattaccgatttcagaaggaggctgtctttctcgacgcgatcgccttctattgcgatgcg
gtctcgcagttgggaaaggacctggaagccgcggacctaagatcaaccggccttctagcg
ctacgtgatcacgtccgcagctacgcgcaatcagcttccttttcgacgctccaacgtacc
atgagggaaatcaagcgcgacctgtctcgcatcgaatacagcatgctgattcgctacacc
agcgtgaccgttcgcaagctaggctctgagcccgactacagtgcagccgtccaagacaca
ttcgatcagtttaagcagggagccgtaaaggattacgatttcaaactccaagactttttt
gagatcaatcatatcggggctggcatcctggacttcatcgcccgcctgtacccttccgtt
tttgccaatctcgatagattcttcgtggacaatcagggatatctcgagccaacaattggt
cgctgggatcgcgaaatacagttctacatttcgtatcttgactacattcggccgctccaa
cgtggtggccttcgtttctgctatcccgccctctcctcgacgtccaaggctgtaaagaac
aagcggaccttcgatcttgccctcgcgcgcaagcttgtcgagtccagtgcccctgtggtg
accaacgactttgagttgaacgaacgagagcgcatcctcgtcgtctccggtccaaaccag
ggtggcaaaaccacctttgcccgcactttcgggcagttgcactatctgggtcgcttgggc
tgccccgtgcccggtaccgatgccaggttgttcttctacgacaaacttctaacccatttc
gagaaagaagaggacattcataaccatcgcggcaagctcgaggacgacctggttcgcatc
catgacgtccttcgacaggccacgtcgaacagtatcgtcatactgaacgaaatcttcact
tccacaacattgcgtgacgcgcttttcctgggtcgaagagttctcgaacggttgattgag
ctcgatctgttgtgtgtctgcgtaaccttcatggacgagctttcgtcgttgggccctcaa
accgtcagcctggtcagtaccgttgttcccgataatccagcggagcgtactttccgcgtc
gtgcgccgaaccgccgacggccgctcatacgcgatgtcgatcgcagaaaaatatcgggtg
acatacgacagcttgaaggagcgcctcgcgtcatga
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