Methylorubrum extorquens DM4: METDI2738
Help
Entry
METDI2738 CDS
T00947
Name
(GenBank) putative DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdi03032
]
METDI2738
03400 DNA repair and recombination proteins [BR:
mdi03400
]
METDI2738
Enzymes [BR:
mdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
METDI2738
DNA replication proteins [BR:
mdi03032
]
Prokaryotic type
DNA Topoisomerases
METDI2738
DNA repair and recombination proteins [BR:
mdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
METDI2738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CAX24396
UniProt:
C7CHZ1
LinkDB
All DBs
Position
2652661..2653863
Genome browser
AA seq
400 aa
AA seq
DB search
MLSEEVGAGVVDPREAARDAGLRYVDDSKPGLRRKRNGKGFRYIDPKGAPVRDAEEIARL
KSLAIPPAYTEVWICPHPNGHIQATGRDEKGRKQYRYHPRFREAREASKFHRIMAFAEAL
PGIRARIDADMGKRGLPREKVLATVVHLLETTLIRVGNDDYARSNKSYGLTTLRDPHVKV
AGSEMRFRFKGKSGKEWSVSVRDRRVAKIVKACQDLPGQELFQYLDEEGQRRDVTSSDVN
AYLREITGEDFTAKDFRTWAGTVLAALALREFEAFDNAAKAKKNLRAAIESVSSRLGNTP
TICRKCYIHPQILDCYLEGGMLLQVKEAVEGELKNELDVLRPEEAAVLSLLRARLERATK
AASKGAKSESTTKIEPPRQTGGRKARATGTKRTSGVRRAA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcggaggaggtcggagccggcgtggtcgatccccgcgaagccgcgcgggatgca
ggcctgcgctacgtggacgattccaagcctggcctgcggcgcaagcgcaacggcaagggc
ttccgctacatcgacccgaagggcgccccggtccgcgacgcggaggagatcgcccggctc
aaaagtctcgcgatcccgccggcctatacggaggtgtggatctgcccgcacccgaacggc
cacatccaggcgaccgggcgcgacgagaaggggcgcaagcagtaccgctaccatccccgc
ttccgcgaggcgcgggaggcctcgaaattccaccgcattatggccttcgccgaggcgctg
ccgggtatccgcgcgcggatcgacgccgacatgggcaagcgcggcctgccgcgcgaaaag
gtgctggccaccgtggtccacctcctggagaccacgctgatccgtgtcggcaacgacgat
tacgcccgctccaacaagagctacggcctcaccaccctgcgcgatccgcatgtgaaggtg
gccggctccgagatgcgcttccgcttcaagggcaagagcggcaaggaatggtcggtttcg
gtgcgcgaccggcgcgtggccaagatcgtgaaggcctgccaggacctgcccggccaggag
ctgttccagtatctcgacgaggagggccagcggcgcgacgtcacctcctcggacgtgaac
gcctacctgcgcgagatcacgggcgaggatttcaccgccaaggatttccgcacctgggcc
ggcacggtgctggcggccctggcgctgcgggagttcgaggcgttcgacaacgcggccaag
gccaagaagaacctgcgcgcggcgatcgagtcggtgtcgtcccggctcggcaacacgccg
accatctgccgcaagtgctacatccacccgcagatcctcgactgctacctcgaaggcggg
atgctgctgcaggtgaaggaggcggtcgagggcgaactcaagaacgaactcgacgtgctg
cgcccggaggaggcggcggtgctgagcctgcttcgggcccgtctggaacgggcgacgaag
gccgcctccaagggtgcgaagagcgagagcacgacgaagatcgagccgccgcgtcagacc
ggaggccgcaaggcgagggcgaccggcacgaagcgcacctccggggtcagacgggcggcg
tga
DBGET
integrated database retrieval system
