Methylorubrum extorquens DM4: METDI2865
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Entry
METDI2865 CDS
T00947
Name
(GenBank) hypothetical protein, putative 5'-nucleotidase domain
Organism
mdi
Methylorubrum extorquens DM4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
choice_anch_I
Big_5
5_nucleotid_C
Calx-beta
HemolysinCabind
Exo_endo_phos
CopC
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAX24521
UniProt:
C7CJ41
LinkDB
All DBs
Position
complement(2787429..2795819)
Genome browser
AA seq
2796 aa
AA seq
DB search
MATSLAAGDIAIVGYDADNPDDFAFVVLRDIEAGTAISFTDNGWSSSGNALRTSEGTYTY
TAPTAVAAGTVIHPTSDGSAGGPDSPVYTSALAPNFSFSTDGDQILAYQGSAANPTFLYA
INFADGATGFAANGTNANTSALPPGLVLGQTAVALGADNGRYAGTLSGTRDGLLTAISAA
GSWSQSDTVRIGAPGYSAFTVTAAPTIPALSIDDVQVAEGDTGTRQLTFTVSLMAPAPSG
GVSFDIATADGSATAGSDYVARALTGQSIAAGQTATTFTVDILGDTVIEPTETFTVTVSN
VRGATVADGQGTGTLINDDTGPRIGGTAIFEAAPSLQGVSGATATAPPVPTNALQLVRLG
AYAATNDPATSAAANAEVVAYDSSTGRLYIQNTAENRIEIAALDATGALSKAGEILLSGL
EQYGAVNSVAVFNGLVAVAYANAAGDAPGRVALFDANGTLLRSLTVGVGPDQIVFTRDGS
RILVANEGEQASATSNPVGGVSIIDVSGGAANAAVTATVGFEGLDGSEATLRARGLAIKP
GNGAAADIEPEYIAISPDDRFAYVTLQEVNGVAIIDLTNPGTAPIAIQPLGSVNHSLAGN
EFDASDRDGPANSQGVGTPSIRIAATPANAPIYGLLQPDAVASFSTGGATYFVTANEGDQ
RVIGGGDDTGDVARLSSIANSCLTPELQALKADPAYARLNVLLRTGDTDGDGVIDQLHTL
GGRGLSIFRQNLDGTITKVRETGGEFEKIFAQIAPERFNNDQVTGNTPDDRSDNKGPEPE
GITIGTVNGRIYAFVGLERQSGVIVYDVTDPANAAYVSYVPPQPGATTDLGPEVLTFIAA
DRNPTGTPLLVSANEVANGGAVVYAALPQGFTQEVAFSANSLAVSRAEGDTGETVFTFTV
ERSNGTLGAVTFTAEITGSGANAADGSDFAGAPALPLTVTGTIAAGAASAQVSVRVQADA
VPEADETFALTLRSASSNQAGIAAAVRPAAGTATGTIVNDDASLISAVQGAGAASPLVGR
TVTVEAIVVGDFQNGDADAKRNLGGFYLQEEAADQDGNALTSEGVFVFEGTGNRLVEVNE
GDRVRVTGTVTEFNGETQIAVSNAATIQVVRAGALTPAEVKATAVTVELPAAGVIGTGTT
AQPDLERYEGMLVRFAQTLSITEQFNLDRFNEIRLAAGGRAETFTNAFEPNATAYAAYLA
QTAARSITYDDGLNTQNQPVENLDGFGPVYATATAPRMGDTVTGLTGTLGFGPAGAYRVR
AIDDGDNRFVTANPRPAEPDPVGGTLKVGTLNVLNYFTTLDTGSAARTAIGLEPRGANSP
EELARQTEKLVTTLIGTGADVLGLTEIENQFRPGDPGNALEYLVGQLNLRAGAGTYASVN
PGAQLDQGQFLGGDAIAVGFIYKPSKVSVAMNTTIERLDDTDVAAFNPALLERSTIGHLF
NGANTSRAALAVTFNEIATGEDFTAIINHFKSKGGTGTGADADQGDGQGAWQQQRELAAT
ALAQWVSMRPTGTQDSDTLLLGDFNAYLKEDALDILKAAGFTNLAEDRLANPYSYVFDGA
YGALDHALASASLNRQVTGVTEWHINADEADAIDYNLDFGRSPSSFDGRSPARESDHDPV
LVGLRLDQTAPVLAASTPADDAARVAVNADIVLRFSEAVRAGTGSITLTDGAGDLRTIAV
SDTAQVAIAGDTVTINPSADLRPGTAYDVIVPAGAFTDAAGNASAAIPQNRLDFTTEQAK
PMTYTLQILHASDWEGGLLATQRAANFAAIVDRLEDTTPNSITLSTGDAWIPSPFYIAGA
DPQMAATYNGVYNQFYELSGAGAYGRLAASPGRADITIQNIVGVQAAVFGNHEFDGGPTE
VANIIGANLGAAAGAADDTWLGALFPYLSANLNFSREAALSGLVHRDGDLATFAQTGPTS
TQTGTGADKIARSTILVENGEKIAVIGATTQINPLISTLGNVTVDGFTGRDEIALLASQI
NAEVDRVLAANPGLNKVIVGTHLQQLANEQALAPLLRNVDVLIGGGSHTLLADADDRLLP
GDRAGGGYPQFFTNASGQTLALVNTASEYSYVGRLNVTFDDQGQVIRDSINPATSGAVAV
DDTTVTQLYGSTAAAFTPGSKGFLVQQVIEGLDVNNDGIQETAGIADIIRQQDGNILGRS
SVYLEGRRGEVRTEETNLGNLTADANLWYAKQFDGAVTVSIKNGGGIRDSIGSFSTTGGS
TAELPPAANPAAGKAAGDISQLDVTNSLRFNNALAMVTVTASELERVLEHAVSSAAPGAT
PGAFPQIGGISFSFDATRQAQTVDVNGTVTREGQRIISAAIVDADGFLIDTLVQDGQLVG
DANRSIRAVTLDFLTTGTSTAPGLGGDNYPFPAYGENRVALSSAAPASLPNAATFAAQGS
EQDALAEYLKAFHSVTPFAQSDTAPAADARIQNLAARSDSVLARGVSRTGAEGHDVLQGT
PFADRLFGGAGDDIIVNSAGDDVLSGGRGNDTLVFNTSFASVTVTEAGSLTAITGPDGRD
LVSGFERYLFSDATIVVNDGQPLVDDLFYLSRNKDVFQAGQDADAHYAQYGAREGRDPNA
FFSTKGYLAANPEVRASGANPLDQYEQAGWKEGRDPGVRFDNEFYLAANPDVKAAGLNPL
AHYLANGQAEGRAIHDAVGRSGDIRGGFDAEYYLLAHADVAQAAGTTDTFAFAARHFEQY
GWQEGRNPNAVFDTKGYLAAYGDVKAAGLNPLTHYDQYGWKEGRDPSAGFDSSTYLSTYT
DVAAAKIDPMQHFLQDGLYEGRSTFADGTFGGGTLG
NT seq
8391 nt
NT seq
+upstream
nt +downstream
nt
atggccacgagccttgccgccggtgacatcgccatcgtcgggtacgatgcggacaacccc
gacgatttcgctttcgtcgtcctgcgggacatcgaggccggcacagccatcagcttcacg
gataacggctggagttcgagcggcaacgcgcttcgcaccagcgagggcacctacacctac
acggcgccgacggccgttgcggccggcaccgtgatccacccgacatccgacggcagcgcg
ggcggccccgacagccccgtctacacgtcggccctcgccccgaacttttcgttcagcacc
gacggcgaccagatcctggcctatcagggctccgccgcgaacccgaccttcctgtacgcg
atcaacttcgccgacggagcaaccggcttcgcggccaacggcacgaacgccaacacctcg
gcactgccgcccggcctcgtcctcgggcagaccgccgtcgcgctgggcgccgacaacggc
cgctacgccggcaccctctcgggcacccgcgacgggctcctgaccgcgatcagcgccgcc
ggatcctggtcccagagcgacacggtccgcatcggcgcccccggctacagcgccttcacg
gtcaccgccgccccgaccatcccggccctgtcgatcgacgatgtccaggtggccgagggc
gataccggcacccggcagctgaccttcacggtctccctgatggcgccggccccgtcgggc
ggcgtcagcttcgacatcgcgaccgccgacggcagcgccaccgccggcagcgactacgtc
gcccgcgcccttaccggccagtccatcgcggccggccagaccgccacgaccttcacggtg
gacatcctcggcgacacggtgatcgagcccaccgagaccttcaccgtcacggtctcgaac
gtccggggcgccacggtggccgacggccagggcaccggcaccctcatcaacgacgacacc
ggcccgcgcatcggcggcaccgcgatcttcgaggcggccccctcgctccagggcgtctcc
ggcgccacggccacggcgcccccggtgccaacgaatgcgcttcaactggtgcggctcggc
gcctacgccgccaccaacgatcctgcgacgtcggccgccgccaacgcggaggtggtggcc
tacgattccagcacgggccgcctctacatccagaacaccgccgagaaccgcatcgagatc
gccgcgctcgacgccaccggcgccctgagcaaggccggcgagatcctgctgtccggtctc
gagcagtacggtgcggtgaactcggtcgcggtcttcaacggcctcgtggcggtcgcctac
gccaacgcggctggcgacgcgccgggccgggtcgccctgttcgatgccaacgggacgctg
ctgcgctcgctgaccgtcggcgtcggcccggaccagatcgtgttcacgcgcgacggcagc
cggatcctcgtcgccaacgagggcgagcaggcgagcgcgaccagcaacccggtcggcggc
gtctcgatcatcgacgtctcgggcggtgcggccaatgccgccgtcacggcgacggtcggc
ttcgaagggctcgacggcagcgaggcaacccttcgcgcccgcggcctcgccatcaagccg
ggcaacggcgcggcggccgacatcgagcccgaatacatcgcgatctcgcccgacgaccgc
ttcgcctacgtcactctgcaggaggtgaacggcgtcgcgatcatcgatctgaccaatccc
ggcacggctcccatcgcgatccaaccgctcgggtcggtgaaccattcgctggccggaaac
gagttcgacgcctccgaccgcgacgggcccgccaactcgcaaggcgtcggtacgccctcg
atccgcatcgcggcgacgcccgccaacgccccgatctacggcctgcttcagccggacgcg
gtggcgagcttctcgacgggcggcgcgacctacttcgtcacggctaacgagggcgaccag
cgcgtcatcggcggcggcgacgacacgggcgatgtcgcccggctcagcagcatcgccaac
agctgcctgaccccggagcttcaggcgctgaaggccgacccggcctatgcccgcctcaac
gtcctgctgcgcacgggcgacaccgacggcgacggcgtgatcgaccagctccacacgctg
ggcgggcgcggcctctcgatcttccgccagaacctcgacggcacgatcaccaaggtgcgc
gagaccggcggcgagttcgagaagatcttcgcgcagatcgcgccggagcgcttcaacaac
gatcaggtcaccggcaacacgccggacgaccgctcggacaacaagggtcccgagcccgaa
ggcatcacgatcgggacggtcaacgggcggatctacgccttcgtcggcctggagcggcag
agcggcgtcatcgtctacgacgtgaccgacccggccaacgcggcctacgtctcctacgtc
ccgccccagcccggcgcgaccaccgatctcggcccggaggtgctgaccttcatcgccgcc
gaccgcaacccgacgggcacgccccttctcgtcagtgccaacgaggtcgccaacggcggc
gcggtcgtctacgcggccctgccccagggcttcacccaggaagtcgcattttccgcgaac
tcgctcgccgtgagccgggcggagggcgatacgggcgagaccgtgttcaccttcacggtc
gagcgcagcaacggcacgctgggcgccgtcaccttcaccgccgagatcaccggcagcggt
gcgaacgcggccgacggaagcgacttcgccggtgccccggccctgccgctgacggtgacg
ggcacgattgccgccggcgccgcttccgcgcaggtcagcgtccgggtccaggcggatgcc
gtgccggaggcggacgagaccttcgccctgaccctgcgcagcgccagttcgaaccaggcc
ggcatcgcggcggccgtgcgcccggcggcgggcaccgcgacgggcacgatcgtcaacgac
gacgcgagcctgatctcggcggtgcagggagccggcgcggcgagcccgctggtcggccgg
accgtcacggtcgaggcgatcgtcgtcggcgacttccagaacggcgacgccgacgccaag
cgcaacctcggcggcttctacctgcaggaagaggcggccgaccaggacggcaacgcgctg
acctcggagggcgtcttcgtcttcgagggcaccggcaaccgcctcgtcgaggtcaacgag
ggtgaccgggtgcgcgtcaccggcaccgtgaccgagttcaacggcgagacccagatcgcg
gtctcgaacgccgcgacgatccaggtggtgcgcgccggtgcgctgacgccggccgaggtc
aaggccacggcggtcaccgtcgagctgccggcggcgggggtgatcggcaccggcaccacc
gcgcagcccgacctcgagcgctacgagggcatgctggtccgcttcgcccagacactctcc
atcaccgagcagttcaacctcgaccgcttcaacgagatccgcctcgccgccggcggccgg
gccgagaccttcaccaacgcattcgagccgaacgcgaccgcctacgccgcctatctcgct
cagacggcggcgcgctcgatcacctacgacgacggcctcaacacgcagaaccagccggtc
gagaatctggacggctttggcccggtctacgccaccgcgacggcgccacgcatgggcgat
accgtgaccgggctcaccggcaccctcggcttcggcccggccggcgcctaccgcgtgcgg
gccatcgacgacggcgacaaccgcttcgtcaccgccaacccccgccccgccgagcccgac
ccggtcggcggcacgctcaaggtcggcaccctcaacgtcctcaactacttcaccaccctc
gacaccggttcggccgcccgcacggcgatcggtctcgagccgcgcggcgcgaactcgccg
gaggaactcgcccggcagaccgaaaagctcgtcacgaccctgatcggcaccggggcggac
gtgctcggcctgaccgagatcgagaaccagttccgcccgggcgaccccggcaacgcgctg
gaatacctcgtcggccagctcaacctgcgtgcgggcgccggcacctacgcctccgtcaat
ccgggcgcgcagctcgaccagggccagttcctcggcggcgacgcgatcgcagtcggcttc
atctacaagccgagcaaggtcagcgtggcgatgaacaccacgatcgagcggctcgacgac
acggacgtggcggccttcaacccggccctgctggagcggagcacgatcgggcacctcttc
aacggcgcgaataccagccgtgccgcgctcgcggtcaccttcaacgagatcgccaccggc
gaggacttcaccgcaatcatcaaccacttcaagtccaagggcggcaccgggaccggcgcg
gatgccgaccagggcgacggccagggcgcctggcagcagcagcgcgaactcgcggccacg
gctttggcccagtgggtctcgatgcggccgacgggcacccaggacagcgacacgctcctg
ctcggcgacttcaacgcctacctcaaggaggacgcgctcgacatcctcaaggcggccggg
tttaccaacctcgccgaggaccgtctcgccaacccatattcctacgtcttcgatggggcc
tacggcgcgctcgaccacgccctggccagcgcgagcctgaatcggcaggtcaccggcgtc
accgagtggcacatcaacgccgacgaggcggacgcgatcgactacaacctcgatttcggc
cgctcgcccagctccttcgacggccgctcgcccgcgcgggaatccgaccacgatcccgtc
ctcgtcggcctgcgcctcgaccagaccgcgccggtcctcgccgcctcgaccccggccgac
gacgccgcgcgggtggccgtgaacgccgacatcgtcctgcgcttcagcgaggcggtccgg
gccggcaccggcagcatcaccctcaccgacggcgccggcgacctgcgcaccatcgcggtc
tcggacaccgcgcaggtcgcgatcgcgggcgacaccgtgacgatcaacccgagcgccgat
ctgcggcccgggaccgcctacgacgtgatcgtgccggccggcgccttcacggacgcggcc
ggcaacgcctccgccgccatcccccagaaccgcctcgacttcaccactgagcaggccaaa
ccgatgacctacacgctccagatcctgcacgcctcggactgggagggcgggctgctcgcg
acccagcgcgcggcgaacttcgcggccatcgtcgatcggctcgaggatacgacgccgaac
tcgatcacgctctcgaccggcgatgcctggatcccgagcccgttctacatcgcgggggcc
gacccgcagatggcggcgacctataacggcgtctacaaccagttctatgagctgtccggc
gccggcgcctacggccggctcgcggcctcccccggccgcgccgacatcaccatccagaac
atcgtcggcgtccaggccgcggtgttcggcaatcacgagttcgatggcgggccgacggag
gtcgccaacatcatcggcgccaatctcggcgccgcggcgggcgccgccgacgacacctgg
ctcggcgcgctcttcccctacctgtcggccaacctcaacttctcccgcgaggccgccctg
tcgggcctcgtgcaccgcgacggcgacctcgccacattcgcccagaccggcccgacctcg
acccagaccggcaccggcgcggacaagatcgcccgctcgacgatcctcgtcgagaacggc
gagaagatcgccgtcatcggcgcgacgacgcagatcaaccccctgatcagcacgctcggc
aacgtcacggtcgacgggttcaccggccgcgatgagatcgcgctgctggcgagccagatc
aacgccgaggtcgaccgggtgctcgcggccaatcccggcctcaacaaggtgatcgtcggc
acgcacctgcagcagcttgccaacgagcaggcgctggccccgctcctgcgcaacgtcgac
gtgctgatcggcggcggctcccacaccctgctcgccgatgccgacgaccggctgctgccc
ggcgaccgggcgggcggcggctacccgcaattcttcaccaacgcgagcggccagacccta
gccctggtgaacaccgcctccgaatactcctatgtcggccgcctcaacgtcaccttcgac
gaccagggccaggtcatccgcgactcgatcaacccggccacctccggcgccgtcgcggtg
gacgacaccacggtaacgcagctctacggctcgaccgccgccgccttcacgcccggctcc
aagggcttcctcgtgcagcaggtgatcgagggcctcgacgtcaacaacgacggcatccag
gagaccgcgggcatcgccgacatcatccgccagcaggacggcaacatcctcggccgctcc
agcgtgtacctggaaggccgccgcggcgaggtccgcacggaagagaccaacctcggcaac
ctcacggcggatgccaacctctggtacgccaagcagttcgacggggcggtcaccgtctcg
atcaagaacggcggcggcatccgcgactcgatcggctcgttctcgacgaccggcggcagc
acggcggagcttcccccggccgccaacccggcggcgggcaaggcggcgggcgacatctcg
cagctcgacgtcaccaactcgctgcgcttcaacaacgcgctcgccatggtcacggtcacc
gcctccgagctggagcgggtgctcgagcacgccgtctcctcggccgctccgggtgcgacg
cccggcgcgttcccccagatcggcgggatcagcttctcgttcgacgcgacccggcaggcc
cagaccgtggacgtcaacggcaccgtcacccgcgaggggcagcggatcatttcggcggcg
atcgtcgatgccgacgggtttctgatcgacaccctggtgcaggacggccagctcgtcggc
gatgcgaaccggagcatccgcgccgtgaccctcgacttcctgaccaccggcacgagtacg
gccccggggctcggcggtgacaactaccccttcccggcctatggcgagaaccgggtggca
ctgagcagcgccgcgccggcctcgctgcccaacgccgcgaccttcgcggcccagggcagc
gagcaggatgcgctcgccgagtacctcaaggcgttccacagcgtgacgccctttgcgcag
tctgacacggcgccggcggccgacgcgcggatccagaaccttgcggcccgctccgacagc
gtgctcgcccgcggcgtcagccggacgggagccgagggccacgacgtgctgcaggggacg
cccttcgccgaccgcctcttcggcggcgcgggcgacgacatcatcgtcaacagcgcgggc
gacgacgtcctgtcgggcgggcgcggcaacgacacgctggtgttcaacacgagcttcgcg
tcggtcaccgtcacggaggccggcagcctcacggccatcaccggaccggatggccgcgac
ctcgtcagcggcttcgagcgctacctgttctccgacgccacgatcgtggtgaacgacggc
cagccgctcgtggacgacctgttctacctgtcccgcaacaaggacgtgttccaggccggc
caggacgccgacgcgcactatgcccaatacggtgcccgcgagggccgcgacccgaatgcc
ttcttctcgaccaagggctatctcgcggccaatcccgaggtgagagcctccggggcgaac
ccgctcgaccagtacgagcaggccggctggaaggaaggccgcgatccgggcgtgcgcttc
gacaacgagttctatctcgcggccaatccggacgtgaaggccgccggcctgaacccgctc
gcgcactaccttgccaacggccaggccgagggccgcgcgatccacgacgccgtcggacgc
agcggggacatccgcggcggcttcgacgcggaatattacctgctcgcccatgccgatgtc
gcgcaggcggccgggaccacggacaccttcgccttcgctgcccgccacttcgagcagtac
ggctggcaggagggccgcaacccgaacgcggtgttcgataccaagggctatctggccgcc
tacggcgacgtgaaggcggcgggcctcaacccgctgacccactacgaccagtacggctgg
aaggagggccgcgatccctcggccggcttcgactcctcgacctacctctcgacctatacc
gatgtcgcggcggccaagatcgacccgatgcagcacttcctgcaagacgggctctacgag
ggccgctcgaccttcgcggacggcactttcggcggcggcaccctcggctga
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integrated database retrieval system
