Methylorubrum extorquens DM4: METDI3056
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Entry
METDI3056 CDS
T00947
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
METDI3056 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdi03019
]
METDI3056 (rnc)
03009 Ribosome biogenesis [BR:
mdi03009
]
METDI3056 (rnc)
03036 Chromosome and associated proteins [BR:
mdi03036
]
METDI3056 (rnc)
Enzymes [BR:
mdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
METDI3056 (rnc)
Messenger RNA biogenesis [BR:
mdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
METDI3056 (rnc)
Ribosome biogenesis [BR:
mdi03009
]
Eukaryotic type
90S particles
RNase
METDI3056 (rnc)
Prokaryotic type
rRNA processing factors
METDI3056 (rnc)
Chromosome and associated proteins [BR:
mdi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
METDI3056 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DUF7966
Motif
Other DBs
NCBI-ProteinID:
CAX24708
UniProt:
C7CL79
LinkDB
All DBs
Position
2968886..2969656
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AA seq
256 aa
AA seq
DB search
MSEDGEGATRSSRARRAHRPRPSLAVLEARIGHVFADPTLLPLALTHVSKAGQSGRVGSY
QRLEFLGDRVLGLAVAETLYKALPGAEEGELSRRLAGLVRRETCAVVAEAWEVGPHLNLG
PGEIQTGGRRNQTILADVCEAILGAVFLDAGYEATRAIVQRAFRPGEETAAPRGRDAKSA
LQEWAMARSLAIPVYEVVERSGPDHAPVFRIAARVEGIEPGYGEGASKRVAEQEAARAVL
AREGIGGTQGQDGSSG
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggacggcgaaggcgccactcgctccagccgcgcccggcgtgcgcatcgcccg
cggccgagcctcgcggtgctggaggcgcgcatcggccatgtcttcgccgacccgacgctg
ctgccgctggcgctcacccatgtgagcaaggccggccagtccggccgagtcggcagctac
cagcgcctcgaatttttgggcgaccgggtactcgggctcgcggtggccgagacgctctac
aaggcgctgcccggcgcggaggagggcgagctgtcgcgccgcctcgccggcctcgtgcgg
cgcgagacctgcgccgtggtggccgaggcctgggaagtcgggccgcatctcaatctcggc
cccggcgagatccagaccggcgggcggcgcaaccagaccattctggccgacgtctgcgag
gcgatcctcggcgcggtgttcctcgacgctggctacgaggcgacgcgggcgatcgtgcag
cgcgccttccgccccggcgaggaaaccgcggccccgcgcgggcgtgacgcgaaatcggcc
ttgcaggaatgggcgatggcgcgcagcctcgcgatcccggtctacgaggtggtggagcgc
tccgggcccgaccacgccccggtcttccggatcgcggcacgggtcgagggcatcgaaccc
ggctacggcgagggcgcctcgaagcgcgtcgccgagcaggaggcggcccgcgccgtactc
gcccgcgagggcatcggcgggacgcagggacaggatggatcgagtggttga
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