Methylorubrum extorquens DM4: METDI3175
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Entry
METDI3175 CDS
T00947
Symbol
rffG
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00521
Streptomycin biosynthesis
mdi00523
Polyketide sugar unit biosynthesis
mdi00525
Acarbose and validamycin biosynthesis
mdi00541
Biosynthesis of various nucleotide sugars
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
mdi01250
Biosynthesis of nucleotide sugars
Module
mdi_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
METDI3175 (rffG)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
METDI3175 (rffG)
01055 Biosynthesis of vancomycin group antibiotics
METDI3175 (rffG)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
METDI3175 (rffG)
00525 Acarbose and validamycin biosynthesis
METDI3175 (rffG)
Enzymes [BR:
mdi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
METDI3175 (rffG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
KR
Motif
Other DBs
NCBI-ProteinID:
CAX24827
UniProt:
C7CM51
LinkDB
All DBs
Position
3092416..3093474
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AA seq
352 aa
AA seq
DB search
MRILVTGGCGFIGSALVLHLVQDLGHEVLTLDAMTYAANPISLQPLADDPRHRLEQADIC
DPARVHALYADFKPQAVMHLAAESHVDRSITDPGAFVRTNVIGTQVMLDGARTHWERLSG
EAKATFRFLHVSTDEVYGSLPPDAFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV
LVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHVEDHARGLVAVLER
GRLGETYLLGGRSVRNNLAVVKALCAAFDQLKPENGPHERLISFVADRPGHDRRYAIDPS
KAEAEVGWRPTKVFEEALTETVRWYLDNEAWWRPIREGRYSGERLGLAPKSA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattcttgtgacgggcggctgcggcttcatcggctccgccctcgtgctgcacctg
gtgcaggatctcggccacgaggtgctcaccctcgatgccatgacctacgccgccaacccg
atctcgctgcagccgctggcggacgacccgcgccaccgcctggaacaggccgacatctgc
gatccggcccgcgtccacgccctctacgccgacttcaagccccaggcggtgatgcatctg
gccgccgaaagccatgtcgatcgctcgatcaccgatccgggcgccttcgtgcgcaccaac
gtcatcggcacccaggttatgctcgacggcgcccgtacccactgggagaggctctccggt
gaggccaaggcgacgttccgcttcctccacgtctcgaccgacgaggtctacggctcgctg
ccgccggacgcgttcttcaccgaggagagccgctacgatccgcgctcgccctactcggcg
tcaaaagcggcctccgaccatctcgcccgcgcctggcacgagacctacggcctgccggtt
ctggtgacgaactgctcgaacaattacggcccgcgtcacttccccgagaagctgatcccg
ctgatgatcctggccgcgctggagggcaagccgctcccggtctacggtgacggcctgaac
gagcgcgactggatccatgtcgaggaccatgcccgcggcctcgtcgcggtgctggagcgc
ggccggctcggcgagacctacctgttgggcgggcgctcggtgcggaacaacctcgctgtg
gtgaaggcgctctgcgccgccttcgaccagctcaagcccgagaacggcccgcacgagcgc
ctgatcagcttcgtcgccgaccggcccggccacgaccggcgctacgccatcgacccgtcg
aaggcggaagccgaggtcggctggcggccgaccaaggtgttcgaggaggcgctgacggaa
accgtgcgctggtacctcgacaatgaggcatggtggcgcccgatccgcgagggccgctat
tccggcgagcgcctcggcctcgcgcccaagagcgcctga
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