Methylorubrum extorquens DM4: METDI3259
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Entry
METDI3259 CDS
T00947
Symbol
ispA
Name
(GenBank) geranyltranstransferase (farnesyl-diphosphate synthase)
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00900
Terpenoid backbone biosynthesis
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
METDI3259 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mdi01006
]
METDI3259 (ispA)
Enzymes [BR:
mdi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
METDI3259 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
METDI3259 (ispA)
Prenyltransferases [BR:
mdi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
METDI3259 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CAX24910
UniProt:
C7CMD4
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All DBs
Position
complement(3188769..3189731)
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AA seq
320 aa
AA seq
DB search
MTSTQASHPSVKADAYTGDFTHRLAQVADTVETFLVDLLGPTLQAGEIARPPRLMEAMRH
AVLGGGKRLRPFLAIETARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGK
PTVHKAYDEATAILVGDALQTLAFEVTADPRWQPDPAIRAELVLGLARASGLGGMVGGQL
LDLSAEGRFGPATMDIDDTLRMQAMKTGAILAFSVEAGALVGGANADERAALLRYGKALG
QAFQVADDILDREASPEAMGKATGKDKDAGKATLVDRLGLDGARAECDRLVALCEEAVAP
WGERAQVLKDAARFTVARKA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaacgcaggcttcccacccctcggtcaaggcggacgcctatacgggtgacttt
acccacaggctcgctcaggtcgccgacaccgtcgagaccttcctcgtcgatctgctcggg
ccgacgctgcaggccggcgagatcgcccgcccgccccggctgatggaggcgatgcgccac
gccgtgctcggcggcggcaagcggctgcggcccttcctcgccatcgagaccgcgcggatg
ctcggtggggccgaggatgcggcgctcgcggcgggtgccggcgtcgaactcgtccactgc
tacagcctcgttcacgacgacctgccggccatggacgacgacgacctgcgccgcggcaag
cccaccgtccacaaggcctatgacgaggccaccgcgatcctcgtcggcgacgcgctccag
acgctggccttcgaggtcaccgccgatccgcgctggcagcccgatccggcgatccgggcc
gaactggtgctcgggctcgcccgcgcctccggcctcggcggcatggtcggcggccagctc
ctcgatctctcggccgaggggcgcttcggcccggccaccatggatatcgacgatactctg
cggatgcaggcgatgaagaccggggcaatcctcgccttctccgtcgaggccggcgctctc
gtcggcggcgcgaacgcggacgagcgggcggcgctgctgcgctacggtaaggcgctcggc
caagcgttccaggtcgccgacgacattctggaccgggaagcctcgccggaagcgatgggc
aaggccaccggcaaggacaaggatgccggcaaggcgacgctggtcgatcgcctcggcctc
gacggcgcgcgggcggagtgcgaccggctggtggcgctctgcgaggaagccgtcgccccc
tggggcgagcgggcgcaggtgctcaaggatgccgcccgcttcaccgtggcgcgcaaggcc
tga
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