Methylorubrum extorquens DM4: METDI3261
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Entry
METDI3261 CDS
T00947
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photolyase (DNA photolyase)
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdi03400
]
METDI3261 (phr)
Enzymes [BR:
mdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
METDI3261 (phr)
DNA repair and recombination proteins [BR:
mdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
METDI3261 (phr)
Prokaryotic type
METDI3261 (phr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
SLBP_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
CAX24912
UniProt:
C7CMD6
LinkDB
All DBs
Position
complement(3190558..3191961)
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AA seq
467 aa
AA seq
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MAIQPARIRVLNDAKPREGAGYVLYLMQQAMRVPFNPALELAIEEANRLELPLLVCFGLL
DGANGFPEANARHYAFLLQGLADAAAALEKRGIAFLLRRATPAEVAIDLSADAALLVLDR
GYLAIQKRWYGAIEREAQCRIVQVEGDVVVPLETVSTKHEYAARTLRPKLRKLWDDYLEP
VEPRGVDHPAKGLIQRLKLKDGLDVSDPEKLLAKLTLDTTVGPVKRFRGGHTEAAGHLER
FLEHAFAGYGAGRNKPEAGAASHMSPYLHFGHISPVEIALAIRAAKDADDDDRSAYLEEL
IVRRELAMNHVFHTQGYDDYARAVPDWARKTLAEHADDPRPKLYSEEELAAGKTHDHYWN
VAMREMRETGYMHNQLRMYWGKKILEWSPSPEEAFARTLRLNNRYFLDGRDANSFTNVAW
IFGLHDRPWQTRQIFGSVRYQSENSLRKFDANGYERAVIRLCEAERG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcgatccaaccggcccgcatccgggtgctgaacgacgcgaagccgcgcgagggcgcc
ggttacgtcctgtacctgatgcagcaggccatgcgcgtcccgttcaatccggcgctggaa
ctcgcgatcgaggaggccaaccgcctcgaacttccgctcctcgtctgcttcggcctgctc
gacggcgccaacggcttccccgaggccaatgcccggcattacgccttcctgctgcagggg
ctcgccgacgcggccgccgccctggaaaagcgcggcatcgcctttctcctgcgccgggca
acgccggctgaggtcgccatcgacctctcggcagacgccgcgctgctggtgctcgaccgc
ggctacctcgcgatccagaaacgctggtacggcgcaatcgaacgggaggcgcaatgccgg
atcgttcaggtcgagggcgacgtggtggtgccgctcgagactgtctcgaccaagcacgaa
tacgccgcgcgcaccctgcgcccgaagctccggaagctctgggacgactatctcgaaccc
gtagagccgcgcggggtcgatcacccggccaaagggctgatccagcggctgaagctgaag
gatgggctcgacgtctccgatccggaaaagcttctcgcgaagctgacgctcgacaccacg
gtcggcccggtgaagcgcttccgcggcggccacaccgaggccgccgggcatctcgagcgc
ttcctggagcacgccttcgccggctacggcgccgggcgcaacaagccggaggccggggcg
gcctcgcatatgagcccctacctgcatttcgggcacatctcgccggtcgagatcgcgctg
gcgatccgcgccgcgaaggacgccgacgatgacgaccgctcggcctatctcgaagagctg
atcgtccggcgtgagttggcgatgaaccacgtcttccacacgcagggttacgacgactac
gcccgcgccgtgcccgactgggcgcgcaagacgctggccgagcacgccgacgacccgcgc
ccgaaactctattccgaggaggaattggcggcggggaagacccacgaccattactggaac
gtcgccatgcgcgagatgcgcgagaccggctacatgcacaaccagctccgcatgtactgg
ggcaagaagatcctcgaatggtcgccctcgccggaggaggcgttcgcccggacgctgcgg
ctcaacaaccgctacttcctcgacgggcgcgacgcgaactccttcaccaacgtcgcctgg
atcttcggcctgcacgaccgcccctggcagacccgccagatttttggaagtgtgcgctat
cagagcgagaactcgctccgaaagttcgacgcgaacggctacgagcgggcggtgatccgg
ctgtgcgaggcggagaggggctga
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