Methylorubrum extorquens DM4: METDI3479 Help Entry METDI3479         CDS       T00947                                  Symbol dapF Name (GenBank) diaminopimelate epimerase   KO K01778   diaminopimelate epimerase [EC:5.1.1.7] Organism mdi  Methylorubrum extorquens DM4 Pathway mdi00300   Lysine biosynthesis mdi00470   D-Amino acid metabolism mdi01100   Metabolic pathways mdi01110   Biosynthesis of secondary metabolites mdi01120   Microbial metabolism in diverse environments mdi01230   Biosynthesis of amino acids Module mdi_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine Brite KEGG Orthology (KO) [BR:mdi00001]  09100 Metabolism   09105 Amino acid metabolism    00300 Lysine biosynthesis     METDI3479 (dapF)   09106 Metabolism of other amino acids    00470 D-Amino acid metabolism     METDI3479 (dapF) Enzymes [BR:mdi01000]  5. Isomerases   5.1  Racemases and epimerases    5.1.1  Acting on amino acids and derivatives     5.1.1.7  diaminopimelate epimerase      METDI3479 (dapF) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DAP_epimerase Pro_racemase DUF6140 Motif Other DBs NCBI-ProteinID:  CAX25122 UniProt:  C7C8I1 LinkDB All DBs Position complement(3407627..3408484) Genome browser AA seq 285 aa AA seqDB search MHGAGNAIVVLDLRGTAVRVTPAEARAIAADVHSRFDQLMVVHDPVTPGTDAFMRIYNTD GSESGACGNGTRCVGYALLDDPAMARPAENGALTLETKAGLVAVKRITERSFTVDMGQPR LRWDEIPLAEPFLDTRRIELQVGPIDDPILHSPAAVSMGNPHAIFFVERDPDSYDLGRIG PLLEAHPIFPERANISIAEVTGRDTIKLRVWERGAGLTLACGTAACATVVAASRLRLIGR AARVALPGGELSIEWRADDHVLMTGPVYLEGEGTFSPDLFAGIDG NT seq 858 nt NT seq  +upstreamnt  +downstreamnt atgcacggcgccggcaacgccatcgtcgtgcttgacctgcgcggcaccgcggttcgggtg acgccggccgaggcccgcgccatcgcggccgacgtgcattcgcgcttcgaccagctcatg gtcgtgcacgatcccgtcacgcccggcaccgatgccttcatgcgcatctacaacaccgac ggctcggaatccggcgcttgcggcaacggcacccgctgcgtcggctacgcgctgctcgac gatccggccatggcgcggcccgccgagaacggcgccctgacgctggagacgaaggccgga ctcgtcgcggtcaagcggatcaccgagcgctccttcaccgtcgatatgggtcagccgcgt ctgcgctgggacgagatcccgctcgccgaaccgtttctcgatacccgccgcatcgagctt caggttgggccgatcgacgatccgatcctgcattcgcccgccgccgtgagcatgggcaac ccgcacgcgatcttcttcgtcgagcgcgaccccgacagctacgacctcggccgcatcggg ccgctgctcgaagcccacccgatcttccccgagcgggccaacatctccatcgccgaggtg acgggccgcgacacgatcaagctgcgcgtctgggagcgcggcgcggggctgacgctggcc tgcggcacggccgcctgcgccaccgtcgtggccgcctcgcgcctgcgcctgatcggccgg gccgcccgcgtggcgcttcccggcggggagctctcgatcgagtggcgcgccgacgaccac gtgctgatgaccggccccgtctatctcgaaggcgagggcacgttctcgcccgacctgttc gccgggatcgacgggtga

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