Methylorubrum extorquens DM4: METDI3518
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Entry
METDI3518 CDS
T00947
Name
(GenBank) conserved hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mdi01002
]
METDI3518
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mdi01011
]
METDI3518
Peptidases and inhibitors [BR:
mdi01002
]
Cysteine peptidases
Family C82
METDI3518
Peptidoglycan biosynthesis and degradation proteins [BR:
mdi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
METDI3518
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
CAX25161
UniProt:
C7C8M0
LinkDB
All DBs
Position
complement(3447236..3449176)
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AA seq
646 aa
AA seq
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MRAASEAGTGIARTLSVALAALLAFSQAPARAEEAPAATESGVVIRKAAVDVANEPVVTP
DASNGAAPTVDAPAPPAEPAPAAEGPPAPVAPSEPLPAAVYARLNDTAPLLQRLTGKERE
AIQAFYALGNFKPIWIENRAFTAAANAAIARLREAGEDGLDPNAYPVPVVGKLSRPDTDA
EIAEADLKLSAALALYARDARGGRVNPAAISRLITPTLDLPPADTVLTRLAASGSGAGDV
LQSYNPRQPGYLALKKRLAGLRAGRTQGAPSVKLPDGPVLKLGMSDPRVPLLRSRFGLDA
SAAGTLDSAPGEADAYDRAVADAVKNFQRSRGLPANGTLTRATVAALASSSVPKTSASEA
DILVNMERWRWLPPELGPNYVFVNVPEFKLKVFRDGQVRDETRVIVGKPTSPTPTFSGMM
EYAVVNPSWYVPPSILKQMLASGRTAGFEVVRRGGNISLRQPPGERNALGFIKFMFPNQH
AVYLHDTPNRSLFSASTRAFSHGCVRVDDPFRFADAVLPSWTQERLKKLIGKGERTLRLP
EKLPVHLAYFTAEVDDLGSYRTLPDLYGYDGPMKVALGLAARSEAVAKAPAKEKRASAEA
ARSAPRQAVAREAVRSERRTAPRRSSDMFGEPESAPTYAYPPRSYW
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctgcatcggaagccggaacgggcatcgcgcggaccctgtccgttgcgctggcg
gccctcctcgctttcagccaagccccggcccgtgccgaggaagcgcctgccgcgacggag
tccggcgtcgtcatccgtaaggccgctgtcgacgttgccaacgagccggtggtcacgccc
gacgcctccaacggcgcggcaccgaccgtcgatgcgcctgcgccccccgcagagccggcg
cccgcggccgaggggccaccggccccggtcgcgccgagcgagccgcttccggctgcggtc
tatgcgcgcctcaacgacaccgcgccgctgctgcaacgcctaaccggcaaggaacgcgag
gcgatccaggccttctacgcgctcggcaacttcaagccgatctggatcgagaaccgggcc
ttcaccgccgccgccaacgcggccatcgcccgcctgagagaagcgggcgaggatgggctc
gatccgaacgcctatcccgttccagtggtgggcaagctcagccgtccggacacggatgcg
gagattgccgaggccgacctcaagctctcggccgcgctcgccctctacgcccgcgacgcc
cgcggcggccgggtgaatccggccgcgatttcgaggctcatcacgcccaccctcgacctg
ccgccggccgacacagtgctgacccgtctcgccgcttcgggctcgggggccggcgacgta
ctgcagagctacaatccgcgccagcccggctacctcgccctgaagaagcgcctcgccggc
ctgcgtgccggccggacgcaaggggcgccgagcgtcaagcttcccgacgggccggtgctc
aagctcgggatgagcgacccccgcgtgccgttgctgcgcagccgcttcggcctcgacgcg
agcgccgccggcaccctcgattcggcgcccggcgaggcggatgcctacgaccgcgccgtc
gccgatgccgtcaagaacttccagcgcagccgtggcctgccggcgaacggaacgctcacc
cgcgccaccgtcgcggcgctcgccagttcgagcgtgccgaagacgagcgcgagcgaggcc
gatatcctcgtcaacatggagcgctggcgttggctgccgcccgaactcgggccgaactac
gtctttgtaaatgtgcccgaattcaagctgaaggtctttcgcgacgggcaggtgcgcgac
gaaacccgggtgatcgtcggcaagccgacgagcccgacgccgaccttctcggggatgatg
gaatacgccgtcgtcaacccgtcctggtacgtgccgccctcgatcctgaagcagatgctg
gcctccggccgcaccgccgggttcgaggtggtgcgccggggcggcaacatttccctgcgc
cagccgccgggcgagcggaacgcgcttggcttcatcaagttcatgttccccaaccagcac
gcggtctacctgcacgacacgccgaaccgctcgctgttctccgcctcgacccgcgcgttc
agccacggctgcgtgcgcgtggacgacccgttccgcttcgccgacgcggtgctgccgagc
tggacccaggagcgcctcaagaagctgatcggcaagggcgagcggacgctgcgcctgccc
gagaagctgccggtgcacctcgcctacttcacggcggaagtggacgatctcggctcctac
cgcaccctgccggacctctatggctatgatgggccgatgaaggtcgcgttggggctcgcc
gcccgctcggaggccgtggcgaaagcgcccgcgaaggagaagcgcgcaagtgccgaggcc
gcccgctcggccccgcgccaggccgtggcgcgcgaggcggtgcgcagcgagcgccgcacc
gccccccgccggtcgtcggacatgttcggcgagccggagagcgcccccacctacgcctat
ccgccgcgcagctactggtag
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