Methylorubrum extorquens DM4: METDI3537
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Entry
METDI3537 CDS
T00947
Name
(GenBank) putative sigma-54 specific transcriptional regulator, Fis subfamily; ATPase and PAS domains
Organism
mdi
Methylorubrum extorquens DM4
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_9
PAS
PAS_4
PAS_8
AAA_5
AAA
AAA_16
PAS_3
Mg_chelatase
AAA_2
bpMoxR
DUF2381
PAS_7
AAA_22
HTH_8
BrxC_BrxD
TIP49
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
CAX25179
UniProt:
C7C8N8
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Position
3471331..3473220
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AA seq
629 aa
AA seq
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MSASALEAPSVYGPAFDENREAMLVFEPLTDRIDDANAAAARLLGHDRAALRAMPVSALH
PEQRPALVVFTQAVLAEGQWWTQGLTPRHGAGKALRLEYAGCVLSGEPTRLLVTLFDLDE
RERRRIDREAEEHMRAGLPEWQRMERIFRDIERGNRLILRAAGEGIYGVNADGITTFVNP
AAERMLGWASADLVGKDMHATVHHTHAGGAHYPHHDCPIYAAFRDGAVHQVDGEVFWRKD
GTCFPVEYTSTPIREGGQLLGAVIVFRDVSQRREDEDRLRAALAEVDSLRERLEQENAYL
KEEIRAESHHQGIIGRSPVMEALLRQIDVVAGTDATVLVTGESGTGKELIARAIHEASRR
RERPLIRVNCAAIPRDLFESEFFGHAKGAFTGALRDRIGRFELADGGTLFLDEVGEIPLD
LQGKLLRVLQERQFERVGEERTRAVDIRLIAATNRDLKEEVRRGRFREDLYFRLNVFPLT
SAPLRERREDVPLIAQHVLKAAARRLNRTDLRLTEADARRLSRYDWPGNVRELENVIERA
AILAERGRLRFDLPETRSTGPVTPAPERPADLGRPLSEEERRARARSEIEAALHISAGKV
FGAGGAAELLGLKPTTLRSRMKVLGIEPL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcatcagcgctggaagcgccctcggtttatggccccgccttcgatgagaatcgc
gaggcgatgctcgtgttcgagcccctgacagaccgcatcgatgacgccaacgcggcggct
gcccggttgctcggccacgaccgcgcggctctgcgggcgatgcccgtgagcgccctgcat
cccgaacagcggcccgcgctcgtggtgttcacccaggccgtcctcgccgaggggcaatgg
tggacacaaggactcacgccgcgccacggcgccggcaaggcgctgcgcctcgaatatgcc
ggctgcgtgctctcaggcgagccgacgcggctcctcgtcactctcttcgatctcgatgag
cgcgagcgccgccgcatcgaccgggaggccgaggagcacatgcgcgccggcctgcccgaa
tggcagcgcatggagcgcatctttcgcgacatcgagcgcggcaaccggctgatcctgcgc
gcggcgggggaggggatctacggcgtcaacgcggacgggatcaccaccttcgtcaacccg
gctgcggagcggatgttgggatgggcctcggccgatctcgtcggcaaggacatgcacgcc
accgtccaccatacccatgcggggggtgcgcattacccgcatcacgactgcccgatctac
gcggccttccgcgacggggccgtgcatcaggtcgatggcgaggtgttctggcgcaaggac
ggcacctgcttccccgtcgagtacacctcgacgccgattcgcgagggcggacaattgctc
ggcgcggtgatcgtgtttcgcgatgtcagccagcgccgtgaggacgaggaccggttgcgg
gccgcactcgccgaagtcgattccctgcgggagcgcctggagcaggagaacgcctacctg
aaggaggagattcgcgccgagagccaccatcaaggcatcatcgggcgtagcccggtcatg
gaggcgttgctgcgccagatcgacgtggtcgcgggcaccgatgccaccgtcctcgtcacc
ggcgaatccggcaccgggaaggagttgatcgcccgggccatccacgaggcgagccgccgc
cgcgagcggccgctgatccgcgtgaactgcgccgcgatcccgcgcgacctgttcgagagc
gagttcttcggccacgccaagggcgccttcaccggggcgctgcgcgaccggatcgggcgg
ttcgaactcgccgacggcggcacgctgttcctcgacgaggtcggggagatcccgctcgac
ctccagggcaagctgctgcgcgtcctgcaagagcgccagttcgaacgggtcggcgaggag
cgcacccgcgcggtcgatatccggctgatcgccgcgaccaaccgcgacctgaaggaggag
gtgcgccgcgggcgttttcgcgaggatctctacttccgcctcaacgtgttccccctgacc
tccgcgcccctgcgggagcgccgcgaggacgtgccgctgatcgcgcagcacgtcctgaag
gccgccgcgcggcgcctcaaccggacggatttgcgcctgaccgaggccgatgcccgccgc
ctgtcccgctacgattggccgggcaacgtgcgtgagttggagaacgtgatcgagcgcgcc
gcgattctcgccgaacgcgggcgcctgcgcttcgatttgccggaaacccgcagcaccggt
cccgtcacgcccgcgccggagcgcccggcggatctcggccggccgctatccgaggaggag
cgccgcgcccgtgcccgcagcgagatcgaggcggcgcttcatatcagtgccggaaaggtc
ttcggtgccggcggcgcggctgagttgctcggccttaagccgacgacgttgcgctcgcgg
atgaaggtgctggggatcgaaccgctctga
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