Methylorubrum extorquens DM4: METDI3557
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Entry
METDI3557 CDS
T00947
Symbol
lpd
Name
(GenBank) dihydrolipoamide dehydrogenase, E3 Component of Pyruvate dehydrogenase multienzyme complex
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00010
Glycolysis / Gluconeogenesis
mdi00020
Citrate cycle (TCA cycle)
mdi00260
Glycine, serine and threonine metabolism
mdi00280
Valine, leucine and isoleucine degradation
mdi00310
Lysine degradation
mdi00380
Tryptophan metabolism
mdi00620
Pyruvate metabolism
mdi00630
Glyoxylate and dicarboxylate metabolism
mdi00640
Propanoate metabolism
mdi00670
One carbon pool by folate
mdi00785
Lipoic acid metabolism
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
mdi01120
Microbial metabolism in diverse environments
mdi01200
Carbon metabolism
mdi01210
2-Oxocarboxylic acid metabolism
mdi01240
Biosynthesis of cofactors
Module
mdi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mdi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mdi_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mdi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
METDI3557 (lpd)
00020 Citrate cycle (TCA cycle)
METDI3557 (lpd)
00620 Pyruvate metabolism
METDI3557 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
METDI3557 (lpd)
00640 Propanoate metabolism
METDI3557 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
METDI3557 (lpd)
00280 Valine, leucine and isoleucine degradation
METDI3557 (lpd)
00310 Lysine degradation
METDI3557 (lpd)
00380 Tryptophan metabolism
METDI3557 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
METDI3557 (lpd)
00670 One carbon pool by folate
METDI3557 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdi04147
]
METDI3557 (lpd)
Enzymes [BR:
mdi01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
METDI3557 (lpd)
Exosome [BR:
mdi04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
METDI3557 (lpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_3
NAD_binding_8
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
DAO
AlaDh_PNT_C
Lys_Orn_oxgnase
2-Hacid_dh_C
Thi4
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
CAX25199
UniProt:
C7C8Q8
LinkDB
All DBs
Position
3494057..3495496
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AA seq
479 aa
AA seq
DB search
MSETYDVLIIGAGPGGYVAAIRSAQLGFKTAVVDREHLGGICLNWGCIPTKALLRSAEIY
HYMQHASDYGLSAKEVSFDAAAIVKRSRGVSGRLNGGVGMLLKKNKVDVIWGEASIESGP
KGNEPGKVTVKETKRAEPPKGAKGAGTYAAKHIIVATGARPRVLPGIEPDKKQIWTYYEA
MVPEKMPKSLLVMGSGAIGIEFASFYRTMGADVTVIELLPQILPVEDAEIAGLARKRFEK
QGIKILTSAKVTKVEKGADSVTATVEDDKGKTQQLTAEKLISAVGVVGNIENLGLEKFGV
KIERGVVVTDGLGRTNVPGVYAIGDVAGPPMLAHKAEHEGVLCVETIKGLHTHPMDKAKI
PGCTYCQPQIASVGVTEGKAKELGLSIKVGRFPFAGNGKAIALGEPDGLVKTIFDAKTGQ
LLGAHMVGAEVTELIQGYVVAMTLESTEEELMHTVFPHPTLSEMMHESVLDAYGRVIHT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaacctatgacgtcctcatcatcggcgcggggcccggcggctacgtggccgcg
atccgctcggcacaactcggtttcaagaccgccgtggtcgatcgcgagcatctcggcggc
atctgcctgaactggggctgcattcccaccaaggcgctgctgcgctcggccgagatctac
cactacatgcagcacgcctccgattacggtctctccgccaaggaggtaagcttcgacgcg
gcagcgatcgtcaagcgctcgcgcggggtgtcgggccgcctcaatggcggcgtcggcatg
ctgctcaagaagaacaaggtcgatgtgatctggggcgaggcctcgatcgagtccggcccc
aagggcaacgagcccggcaaggtcacggtcaaggagaccaagcgcgccgagccgccgaag
ggcgccaagggtgcaggcacctacgcggccaagcacatcatcgtcgcaaccggcgcccgt
ccgcgcgtgctgcccggcatcgagcccgacaagaagcagatctggacctattacgaagca
atggtcccggagaagatgcccaagagcctgctggtgatgggctcgggcgcgatcggcatc
gagttcgcctcgttctaccgtacgatgggcgccgacgtgacggtcatcgagttgctgccg
cagatcctgccggtcgaggatgcggagatcgccggtctcgcccgcaagcgtttcgagaag
cagggcatcaagatcctgaccagcgccaaggtgacgaaggtcgagaagggcgccgactcg
gtcaccgccacggtcgaggacgacaagggcaagacgcagcagctcaccgccgagaagctg
atctcggccgtcggcgtcgtcggcaatatcgagaatctgggtcttgagaagttcggggtg
aagatcgagcgcggcgtcgtcgtgaccgacgggctcggacgcaccaacgtgccgggcgtc
tacgccatcggcgatgtggccggacccccgatgctggcccacaaggccgagcacgaaggc
gtcctctgcgtcgagaccatcaagggcctgcacacccatccgatggacaaggccaagatc
ccgggctgcacctattgccagccgcagatcgccagcgtcggcgtcaccgaggggaaggcg
aaggagctcggcctctcgatcaaggtcggccgcttccccttcgcgggcaacggcaaggcg
atcgcgctcggcgagccggacggtctcgtcaagacgatcttcgatgccaagaccggccag
ttgcttggcgcccacatggtcggagcggaagtcaccgaactgatccagggctacgtcgtc
gcgatgactctggaatcgaccgaagaagagctgatgcacacggtgttcccgcatccgacg
ctctccgagatgatgcatgagagcgtgctcgatgcgtatggccgggtgatccatacctga
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