Methylorubrum extorquens DM4: METDI3589
Help
Entry
METDI3589 CDS
T00947
Name
(GenBank) putative helicase domain protein, DEAD/DEAH motif
KO
K19789
DNA repair protein RadD
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdi03400
]
METDI3589
DNA repair and recombination proteins [BR:
mdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
METDI3589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
DZR
DZR_2
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
CAX25229
UniProt:
C7C9M7
LinkDB
All DBs
Position
3525141..3526778
Genome browser
AA seq
545 aa
AA seq
DB search
MLRLREYQRAALDALDCHWDQGGGPGLVVLPTGAGKALVIAALIREWLDRAPGARICVLT
HVRELVVQNHGELLAYWPGAPAGIFSAGVGRREVHAQVTFCSIQSVRDRAELFGAIDLIV
IDEAHLVPRASETGYGRFLAAARAGNPDLKVAGFTATPYRLDSGRLDEGEGRVFERIVYE
SLVGDLIHQGFLAPLICKATALALDVSGVPKRGGDYIPSALEAAVNREWITRAAVEEMVG
YGRERRAWLAFCAGLAHAASVRDAIRAEGISCETVTAETGKRERDRMVRDFRAGKIRCLV
SVGVLSTGFNVPEVDLIALLRPTQSAGLYVQQVGRALRRAPGKSDAIVLDYAGLVRMHGP
VDAVTARSVALGPAALGMARAKPCPGCGALIALNASTCEACWVEPEPEDEEAPHAASAED
AMPILSESICPWREVTGWRLDRGPGGSGPDRLEVALRWRGGGCRVEVCLEHSGHAREKAV
QWWRAFGGADPVPMSVAAALERADELEQPETLRVEAAGRLSESVTVRFSDGRRFRDLRRW
GTLAA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccttcgcgagtaccagcgcgccgccctcgacgcgctcgattgtcattgggac
cagggcggcgggcccggcctcgtcgtgctgccgaccggcgccggcaaggcgctcgtcatc
gcggcgctgatccgcgaatggctggatcgggcgccgggggcgcggatctgcgtcctcacc
catgtccgcgaactcgtggtgcagaaccacggcgagttgctcgcgtactggcctggggcg
cctgcgggcatcttttccgccggcgtcggccggcgggaagttcacgcgcaggtcaccttc
tgctcgatccaatccgtgcgtgaccgggccgagttgttcggcgccatcgacctcatcgtg
atcgacgaggcccatctcgtgccgcgcgcgagcgagaccggctacggccgtttcctcgcc
gcggcgcgggccggcaacccggatcttaaggtcgcgggcttcaccgccacgccctaccgg
ctcgattctggccggctcgacgagggcgagggccgggtgttcgagcggatcgtctacgaa
tctctcgtcggcgacctgatccatcagggctttctggcgcccctgatctgcaaggcgacc
gcgctcgccctcgatgtgtcgggggtgccgaagcgcggcggcgactacatcccctcggcg
ctggaggcggcggtcaaccgtgaatggatcacccgcgcggcggtcgaggaaatggtgggg
tacggccgcgagcggcgggcgtggctcgccttctgcgccgggctcgcgcacgcggcctcc
gtgcgcgatgccatccgggcggaagggatttcctgcgagaccgtcacggccgaaaccggc
aagcgcgagcgagaccggatggtgcgcgacttccgcgccggaaagatccgctgcctcgtc
tcggtcggcgtgctctccaccggcttcaacgtgccggaagtcgatctcatcgccctgctg
cgcccgacccaatcggccgggctctacgtgcagcaggtcggccgggccctgcgccgggcg
ccgggcaagtcggatgcgatcgtgctcgattatgccggactggtgcggatgcacggcccc
gtagacgcggtgaccgcccgcagcgtcgcgctcgggccggcggcgttgggaatggcgcgg
gccaaaccctgccccggctgcggcgcgctgatcgccctcaacgccagcacctgcgaggcc
tgctgggtggagcccgaaccggaggacgaggaggcaccccacgccgcgagcgcggaggac
gcgatgccgatcctgtccgaatcgatctgcccctggcgcgaggtgaccggctggcgcctc
gaccgcggccccggcggctccggcccggaccggctcgaagtcgccctgcgctggcggggc
ggcgggtgccgggtcgaggtttgcctggagcattccggccatgcccgcgagaaggcggtg
caatggtggcgcgcattcggcggcgccgatccggtgccgatgtcggtcgccgcagccctg
gaacgggccgacgagttggaacagccggagaccctccgggtcgaggccgccggccggctc
tccgagagcgtgacggtgcgtttttccgacgggcggcggttccgcgacctgcgccgctgg
ggcaccctggcggcttga
DBGET
integrated database retrieval system
