Methylorubrum extorquens DM4: METDI3681
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Entry
METDI3681 CDS
T00947
Name
(GenBank) conserved hypothetical protein, DNA-binding and glycosylase domains; putative DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
METDI3681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdi03400
]
METDI3681
Enzymes [BR:
mdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
METDI3681
DNA repair and recombination proteins [BR:
mdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
METDI3681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
CAX25320
UniProt:
C7C9W8
LinkDB
All DBs
Position
complement(3620719..3621642)
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AA seq
307 aa
AA seq
DB search
MTCTPSPATREDRARFTLACPQPYDWLHLERFLADHASPGVEAVTPGRYARTFALDGHRG
TLAVTNEADALSVRIRGLGSDDHENILTRVRAMFDLDADPRAVAAGLGRDPFTAALVGRR
PGLRMPGAFDGFELAVRAILGQQVSVAAATRLAGRLVAGFGTPLDGETCGNEPGLTHLFP
TPEQLVDAEISLVLNMPRARGRAIQGLAAAMLATPDLFAPGGELDATVARLKALPGIGDW
TAHYVAMRALAQADAFPAGDVGLMRALDAGDGRPSRLALLDRAAAWRPWRAYAAIHLWAE
DAARRMP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgcaccccttcgcctgcgacccgagaggacagggcccgcttcacgctggcctgc
ccccagccctacgattggctgcatctcgaacgcttcctcgccgaccatgcgagccccggc
gtcgaagccgtgacgcccgggcgctatgcccgcacctttgccctcgacgggcatcgcggc
accctcgccgtcacgaatgaggcggacgctctgtcggtccgtattcgcggcctcggctcg
gacgaccacgaaaacatcctcacacgggtgcgggcgatgttcgatctcgacgccgacccg
cgggcggtcgccgccggactcggccgcgatccgttcaccgccgccctcgtgggacgccgg
ccgggtttgcggatgccgggcgccttcgacgggttcgaactggcggtccgggcgatcctc
ggccagcaggtctcggtcgcggccgcgacgcgtctcgccggccgcctcgttgcgggtttc
ggcacgcccctcgacggggagacgtgcgggaacgagccgggtctcacccacctgtttccg
acgccggagcaacttgtggacgccgaaatctcgctggtgctcaacatgccccgcgcccgc
ggccgggcgatccaggggcttgccgcggcgatgcttgcgacgccggatctgttcgcgccc
ggcggcgaactcgacgcgacggttgcccggctgaaggccctgcccggcatcggggactgg
accgcgcattacgtcgccatgcgcgcactggcgcaagccgacgcctttccggcgggggat
gtcgggctgatgcgtgccctcgatgccggcgacgggcggccgagccggctggcacttctc
gatcgtgcggcggcttggcggccctggcgggcctatgccgcgatccatctctgggccgag
gatgccgcgcggaggatgccatga
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