Methylorubrum extorquens DM4: METDI3925
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Entry
METDI3925 CDS
T00947
Symbol
icd
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00020
Citrate cycle (TCA cycle)
mdi00480
Glutathione metabolism
mdi00720
Other carbon fixation pathways
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
mdi01120
Microbial metabolism in diverse environments
mdi01200
Carbon metabolism
mdi01210
2-Oxocarboxylic acid metabolism
mdi01230
Biosynthesis of amino acids
mdi04146
Peroxisome
Module
mdi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mdi_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
METDI3925 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
METDI3925 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
METDI3925 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
METDI3925 (icd)
Enzymes [BR:
mdi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
METDI3925 (icd)
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Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
CAX25560
UniProt:
C7CC13
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All DBs
Position
complement(3856759..3857973)
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AA seq
404 aa
AA seq
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MAKIKVANPVVELDGDEMTRIIWAEIKNKLIHPYLDLDLDYYDLGVEHRDATNDQVTIDA
AEAIKRHGVGVKCATITPDEARVEEFKLKEMWRSPNGTIRNILGGVIFREPIICKNVPRL
VPGWTQPFVIGRHAYGDQYRATDFKVPGKGRLTIKFEGDDGTVIEKEVFKFPDAGVAMSM
YNLDQSIIDFARASFNYGLARKYPVYLSTKNTILKTYDGRFKDLFQKVFDEEFKSKFLSL
GLTYEHRLIDDMVASCLKWSGGYVWACKNYDGDVQSDTAAQGFGSLGLMTSVLMTPDGQT
VEAEAAHGTVTRHYREHQKGKATSTNSIASIFAWTRGLSHRAKLDGNADLAKFAATLEKV
CVDTVEAGHMTKDLALLVGPDQKWLTTNGFLNKVDENLKTAMAV
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcaaggtggccaatccggtcgtcgagctcgacggcgacgagatgacccgg
atcatctgggcggagatcaagaacaagctcatccacccctacctcgatctcgatctcgac
tattacgatctcggtgtcgagcaccgcgacgcgacgaacgatcaggtgacaatcgatgcg
gccgaggcgatcaagcgccacggcgtcggcgtaaaatgcgccacgatcacgccggacgag
gcccgcgtcgaggaattcaagctcaaggagatgtggcggtcgcccaacggcacgatccgc
aacatcctcggcggcgtcatcttccgcgagccgatcatctgcaagaacgtgccgcgcctc
gtgcccggctggacccagcccttcgtgatcggccgccacgcctacggcgaccagtaccgc
gccaccgacttcaaggtgccgggcaagggccgcctcaccatcaagttcgagggtgatgac
ggcaccgtcatcgagaaggaggtgttcaagttccccgacgccggcgtcgcgatgtcgatg
tacaacctcgaccagtcgatcatcgacttcgcccgggcctcgttcaactacggcctcgcc
cgcaaatacccggtctatctgtccaccaagaacaccatcctcaagacctatgacggccgc
ttcaaggacctgttccagaaggtgttcgacgaggagttcaagtcgaagttcctgtcgctc
ggcctgacctatgagcaccgcctgatcgacgacatggtggcctcgtgcctcaagtggtcg
ggcggctatgtctgggcctgtaagaactacgacggcgacgtacagtcggacacggcggcc
cagggattcggctcgctcggcctgatgacctcggtgctgatgacgccggacggacagacc
gtggaggccgaggccgcccacggcaccgtgacgcgccactaccgcgagcaccagaagggc
aaggcgacctcgaccaactcgatcgcctcgatcttcgcctggacccgcggcctgtcgcac
cgggccaagctcgacggcaacgccgatctcgcgaagttcgccgcgaccctggagaaggtc
tgcgtcgacacggtcgaggccggccacatgacgaaggatctcgcgctcctcgtcggcccg
gaccagaagtggctcaccaccaacggcttcctcaacaaggtcgatgagaacctgaagacg
gcgatggccgtctga
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