KEGG   Methylorubrum extorquens DM4: METDI4031
Entry
METDI4031         CDS       T00947                                 
Name
(GenBank) putative fatty acid oxidation complex subunit alpha (enoyl-CoA hydratase and epimerase and isomerase; 3-hydroxyacyl-CoA dehydrogenase) (fadJ-like; synonym yfcX)
  KO
K01782  3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Organism
mdi  Methylorubrum extorquens DM4
Pathway
mdi00071  Fatty acid degradation
mdi00280  Valine, leucine and isoleucine degradation
mdi00310  Lysine degradation
mdi00362  Benzoate degradation
mdi00380  Tryptophan metabolism
mdi00410  beta-Alanine metabolism
mdi00640  Propanoate metabolism
mdi00650  Butanoate metabolism
mdi00907  Pinene, camphor and geraniol degradation
mdi00930  Caprolactam degradation
mdi01100  Metabolic pathways
mdi01110  Biosynthesis of secondary metabolites
mdi01120  Microbial metabolism in diverse environments
mdi01200  Carbon metabolism
mdi01212  Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:mdi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00640 Propanoate metabolism
    METDI4031
   00650 Butanoate metabolism
    METDI4031
  09103 Lipid metabolism
   00071 Fatty acid degradation
    METDI4031
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    METDI4031
   00310 Lysine degradation
    METDI4031
   00380 Tryptophan metabolism
    METDI4031
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    METDI4031
  09109 Metabolism of terpenoids and polyketides
   00907 Pinene, camphor and geraniol degradation
    METDI4031
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    METDI4031
   00930 Caprolactam degradation
    METDI4031
Enzymes [BR:mdi01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     METDI4031
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     METDI4031
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     METDI4031
SSDB
Motif
Pfam: 3HCDH_N ECH_1 3HCDH ECH_2 DAO NAD_binding_2 UDPG_MGDP_dh_N Sacchrp_dh_NADP F420_oxidored NAD_Gly3P_dh_N FAD_binding_3 2-Hacid_dh_C ApbA NAD_binding_8 Pyr_redox_2 TrkA_N GIDA Pyr_redox AlaDh_PNT_C Shikimate_DH
Other DBs
NCBI-ProteinID: CAX25666
UniProt: C7CCT6
LinkDB
Position
complement(3959005..3961206)
AA seq 733 aa
MTATENFRFETDADGIALATWDMPGRSMNVITMEVMAELERIVDAVVADEAIKGCVIVSG
KNNFSGGADLTMLQGLGVEYERLKASEGEEVAMRHFFEESRRLSLVFRKLETCGKPFAAA
VHGLCLGGAFELALACHHRVLADDDKTRVGLPEIKVGLFPGGGGTQRVSRLMQTGDALQM
LFKGEQIRALMAKNMGLAHAVAPAAEIVERAKAWIREGGSAVAPWDVPKFKAPSGKVYSP
AGMMIWPPANAIYRRETHDNYPAAKAILASVYEGLQLPMDLGLRVESRYFAHILRTKEAQ
AMIRTLFISMGEINKGARRPKDVEATKVGKVGVIGAGFMGAGVAYVTAQAGMQVVLIDRD
QEAADAGKAHCHKLITGQINRGKAKTADRDALLARITATPDYGTLSDCDLVIEAVFEDPK
VKAEVIAKVEAALPAHAIFASNTSTLPISGLAQTSKRPEQFVGIHFFSPVEKMLLVEIIR
GNQTGDRAVATALDYVRAIKKTGIVVNDSRGFFANRCVLAYIHEGHKMLTEGVPPAMIEN
VARMAGMPVGPLSLNDEVALDLGLKIMRATEAQLGEGAVDPDQKRLLVAMVETHGRLGRK
NKRGFYDYPEGGQKTLWPGLAEIQPNRLDPEGIDIDELKHRFLVVQALEAARTMQEGVVT
DPREADVGSILGFGFAPFTGGALSYIDFMGAKAFVALARQLEARHGARFTPPDNLLAMAE
SGARFYDALKQAA
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgaccgcaaccgagaatttccgcttcgagaccgatgccgacggcatcgcgctcgcgacc
tgggacatgccgggccgttcgatgaacgtcatcaccatggaggtgatggcggagctggag
cggatcgtcgacgcggtcgtcgccgacgaggccatcaagggctgcgtcatcgtctcgggg
aagaacaacttctccggcggcgccgacctcaccatgcttcagggcctcggggtcgagtac
gagcggctgaaggcgagtgagggcgaggaggtggccatgcgccacttcttcgaggaatcg
cggcgcctcagcctcgtgttccgcaagctggagacctgcggcaagccgttcgcggcggcg
gtgcacggcctgtgcctcggcggcgccttcgagctggcgctggcctgccatcaccgggtg
ctcgccgacgacgacaagacccgcgtcggcctgcccgagatcaaggtcggcctgttccca
ggcggcggcggcacgcagcgcgtgtcccgtctgatgcagaccggcgacgcgctgcagatg
ctgttcaagggcgagcagatccgcgcgctcatggccaaaaacatggggctggcccacgcc
gtcgccccggccgcggagatcgtcgagcgggccaaggcctggatccgcgagggcggctca
gcggtggcaccgtgggacgtgccgaagttcaaggcgccgtccggaaaggtctactcgccc
gccggcatgatgatctggccgccggccaacgcgatctaccgccgcgagacccacgacaat
tatccggccgccaaggcgatcctggcctcggtctacgagggcctgcaactgccgatggac
ctcggcctccgggtcgagagccgctacttcgcccatatcctgcgcaccaaggaagcgcag
gcgatgatccgcaccctgttcatctccatgggtgagatcaacaagggcgcccgccgcccg
aaggacgtggaggcgaccaaggtcggcaaggtcggcgtcatcggcgccggcttcatgggc
gcgggtgtcgcctacgtcacggcgcaggccgggatgcaggtcgtgctgatcgaccgcgat
caggaggcggccgatgccggcaaggcgcattgccacaagctcatcaccggccagatcaac
cgcggcaaggccaagaccgccgaccgcgacgcgctcctcgcccgcatcaccgccacgccc
gattacggcaccctgtccgattgcgacctcgtgatcgaggcggtgttcgaggacccgaag
gtcaaggccgaggtgatcgccaaggtcgaggcggcgctgcccgcgcacgcgatcttcgcc
tccaacacctcgaccctgccgatctccggcctcgcccagacctcgaagcgccccgagcag
ttcgtcggcatccacttcttctcgccggtggagaagatgctgctcgtggagatcatccgc
ggcaaccagaccggcgaccgcgcggtcgccaccgccctcgattacgtgcgcgcgatcaag
aagaccggcatcgtcgtcaacgattcccgcggcttcttcgccaaccgctgcgtgctcgcc
tacatccatgagggccacaagatgctcaccgagggcgtgcccccggcgatgatcgagaac
gtggcgcggatggccggcatgccggtcggcccgctctcgctcaacgacgaggtggcactc
gatctcggcctcaagatcatgcgggcgaccgaggcgcagctcggcgagggcgccgtcgat
ccggaccagaagcggctcctcgtcgcgatggtcgagacgcatggccggctcgggcgcaag
aacaagcgcggcttctacgactaccccgagggcggccagaaaacgctctggccggggctc
gccgagatccagccgaaccggctcgacccggagggcatcgacatcgacgagctgaagcac
cgcttcctcgtggtgcaggcgctggaggccgcccgcacgatgcaggagggcgtggtgacc
gatccgcgcgaggcggatgtcggctcgatcctcggcttcggcttcgccccgttcaccggc
ggcgcgctctcctacatcgacttcatgggcgcgaaggccttcgtggcgctggcccggcag
ctggaggcccggcacggcgcccgcttcaccccgccggacaacctcctggcgatggccgaa
tccggggcgcgcttctacgacgcgctgaagcaggcggcgtag

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