Methylorubrum extorquens DM4: METDI4593
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Entry
METDI4593 CDS
T00947
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00020
Citrate cycle (TCA cycle)
mdi00190
Oxidative phosphorylation
mdi00650
Butanoate metabolism
mdi00720
Other carbon fixation pathways
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
mdi01120
Microbial metabolism in diverse environments
mdi01200
Carbon metabolism
Module
mdi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mdi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mdi_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
METDI4593 (sdhA)
00650 Butanoate metabolism
METDI4593 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
METDI4593 (sdhA)
00720 Other carbon fixation pathways
METDI4593 (sdhA)
Enzymes [BR:
mdi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
METDI4593 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
HI0933_like
Pyr_redox_2
Thi4
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
CAX26216
UniProt:
C7CGA4
LinkDB
All DBs
Position
4471578..4473395
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AA seq
605 aa
AA seq
DB search
MASNGTNGGAPAYAITDHTFDVVIVGAGGAGLRATVGCSQAGLRTACITKVFPTRSHTVA
AQGGISASLGNMGPDDWRWHMYDTVKGSDWLGDQDAIEYLVRNAPAAVYELEHWGVPFSR
TDEGKIYQRPFGGMTTDYGKGTAQRTCAAADRTGHAMLHTLYGQAVKNKTQFFIEYFALD
LIMDEDGRCRGVMAIDQATGEIHRFRAQQTILATGGYGRAYFSATSAHTCTGDGNAMVLR
AGLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDV
VSRSMTMEIRDGRGVGKEGDHIFLHLDHLDPKILHERLPGISESAKIFAGVDVTKEPIPV
LPTVHYNMGGIPTNFHGEVLTLKNGNPDTVVPGLMALGEAACVSVHGANRLGSNSLIDLV
VFGRAAGLRCADIVEPDARQPELPKGSADKALTRLDRFRYADGGTPTAQLRDRMQRTMQN
NCAVFRTGEVLEEGKGLIHEVWRGVSDIAITDRSLVWNTDLLETLEFDNLIGQAVVTMES
AVNRKESRGAHAREDFPDRDDKEWMKHTLAWLDQSKHGVEIDYRPVHTYTMSNDIQYIEP
KARVY
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaacggaacgaacggcggcgcgcccgcctacgccatcaccgaccacaccttc
gacgtggtgatcgtcggcgccggcggcgcgggtctgcgcgccacggtcggctgctcccag
gccgggcttcgcaccgcctgcatcaccaaagtcttcccgacccgctcgcacaccgtggcg
gcgcagggcggcatctccgcctcgctcggcaatatggggccggacgattggcgctggcac
atgtacgacaccgtgaagggctcggactggctcggcgaccaggacgcgatcgagtacctc
gttcgcaacgcgcccgccgccgtctacgaactcgagcactggggcgtgccgttctcccgc
acggacgagggcaagatctaccagcggcccttcggcggcatgaccaccgattacggcaag
ggcaccgcccagcgcacctgcgccgcggccgaccgcaccggccacgccatgctccatacg
ctctacgggcaggcggtgaagaacaagacccagttcttcatcgagtacttcgccctcgac
ctgatcatggacgaggacggccgctgccgcggcgtgatggcgatcgaccaggccaccggc
gagatccaccgcttccgcgcccagcagaccatcctcgccaccggcggctacggccgcgcc
tacttctcggcgacctcggcccatacctgcaccggtgacggcaatgccatggtgctgcgc
gccggcctgccgctgcaggacatggagttcgtgcagttccaccccaccggcatctacggc
gccggctgcctcatcacggagggcgcgcgcggcgagggcggctacctcaccaactccgag
ggcgagcgcttcatggagcgctacgccccctcggccaaggacctcgcctcccgcgacgtg
gtctcccgctccatgaccatggagatccgcgacggccgcggcgtgggcaaggaaggcgac
cacatcttcctgcatctcgaccatctcgacccgaagatcctgcacgagcgcctgcccggc
atctcggagagcgcaaagatctttgcgggcgtcgacgtgaccaaggagccgatcccggtc
ctgccgacggtccactacaacatgggcggcatcccgacgaacttccacggcgaggtgctg
actctgaagaacggcaaccccgacacggtggtgccgggcctgatggcgctcggcgaggcg
gcctgcgtctcggtgcatggcgccaaccgcctcggctcgaactcgctgatcgacctcgtg
gtgttcggccgcgccgcgggtctccgctgcgccgacatcgtcgagcccgacgcccgccag
ccggaactgccgaagggctcggccgacaaggcgctcacgcgcctcgaccgcttccgctac
gccgacggcggcaccccgaccgcgcagctgcgcgaccggatgcagcggacgatgcagaac
aactgcgccgtcttccgcaccggcgaggtgctggaggagggcaagggcctgatccacgag
gtttggcgcggcgtctccgacatcgcgatcaccgaccgttcgctggtgtggaacaccgac
ctgctcgagaccctggaattcgacaacctgatcggtcaggcggtcgtgaccatggaatcg
gcggtcaaccgcaaggaaagccgcggcgcgcatgcccgcgaggacttccccgaccgcgac
gacaaggagtggatgaagcacacgctcgcgtggctcgaccaatccaagcacggcgtcgag
atcgattaccgcccggtccacacctacacgatgtcgaacgacatccagtacatcgagccg
aaggcgcgagtgtactga
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