Methylorubrum extorquens DM4: METDI4595
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Entry
METDI4595 CDS
T00947
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase, iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00020
Citrate cycle (TCA cycle)
mdi00190
Oxidative phosphorylation
mdi00650
Butanoate metabolism
mdi00720
Other carbon fixation pathways
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
mdi01120
Microbial metabolism in diverse environments
mdi01200
Carbon metabolism
Module
mdi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mdi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mdi_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
METDI4595 (sdhB)
00650 Butanoate metabolism
METDI4595 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
METDI4595 (sdhB)
00720 Other carbon fixation pathways
METDI4595 (sdhB)
Enzymes [BR:
mdi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
METDI4595 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer2
Motif
Other DBs
NCBI-ProteinID:
CAX26217
UniProt:
C7CGA5
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All DBs
Position
4474057..4474881
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AA seq
274 aa
AA seq
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MAQFNLPKNSQVTEGRTWPAPDGAKNLQTFRIYRWNPDDGKNPRIDTYRVDRDDCGPMVL
DALLWIKNKVDPTLVFRRSCREGICGSCAMNIEGQNALACTMGIDECKTPDNALPFLTRK
DKDGAVRIYPLPHMPVLKDLVPDLTNFYAQHASIEPWLQTETPAPEKEWKQTPEDRARLD
GLYECILCACCTTSCPSYWWNGDKFLGPAALLQAYRWLIDSRDENTGERLDGLHDPFRLY
RCHTIMNCANTCPKNLNPAKAIAEIKKMMVEREV
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttcaatcttcccaagaactcccaggtcaccgaaggccggacctggccagcg
ccggacggcgccaagaacctccagacgttccggatctatcgctggaacccggatgacggg
aagaacccgcgcatcgacacctatagggtcgatcgcgacgattgcggcccgatggtcctc
gacgccctgctctggatcaagaacaaggtcgatccgacgctggtcttccgccgctcctgc
cgcgagggcatctgcggttcctgcgccatgaacatcgagggccagaacgcgctcgcctgc
accatgggcatcgacgagtgcaagacccccgacaacgcgctgccgttcctgacccgcaag
gacaaggatggggcggtgcggatctacccgctgccgcacatgccggtcctgaaggacctc
gtgccggatctgaccaacttctacgcgcagcacgcgtcgatcgagccctggctccagacc
gagacgcccgcgcccgagaaggagtggaagcagacgcccgaggaccgcgcccggctcgac
ggcctctacgagtgcatcctgtgcgcctgctgcaccacgagctgcccgagctactggtgg
aacggcgacaagttcctcggcccggccgccctgcttcaggcctatcgctggctgatcgac
agccgcgacgagaacaccggtgagcgcctcgacgggctgcacgatccgttccggctctac
cgctgccacacgatcatgaactgcgccaacacctgcccgaagaacctcaatccggccaag
gcgatcgccgagatcaagaagatgatggtcgaacgcgaagtctga
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