Methylorubrum extorquens DM4: METDI4648
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Entry
METDI4648 CDS
T00947
Symbol
fadD
Name
(GenBank) acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase)
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00061
Fatty acid biosynthesis
mdi00071
Fatty acid degradation
mdi01100
Metabolic pathways
mdi01212
Fatty acid metabolism
mdi02024
Quorum sensing
mdi04146
Peroxisome
Module
mdi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
METDI4648 (fadD)
00071 Fatty acid degradation
METDI4648 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
METDI4648 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
METDI4648 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mdi01004
]
METDI4648 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdi04147
]
METDI4648 (fadD)
Enzymes [BR:
mdi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
METDI4648 (fadD)
Lipid biosynthesis proteins [BR:
mdi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
METDI4648 (fadD)
Exosome [BR:
mdi04147
]
Exosomal proteins
Exosomal proteins of breast milk
METDI4648 (fadD)
Exosomal proteins of breast cancer cells
METDI4648 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
bpX2
Motif
Other DBs
NCBI-ProteinID:
CAX26270
UniProt:
C7CGF8
LinkDB
All DBs
Position
4526737..4528473
Genome browser
AA seq
578 aa
AA seq
DB search
MAQDRSAERPWLAAYPPGIPADIDVDSVGTVVDLFDRSVLRFAERPAITCFGASLRYREV
GAAAQAVAAWLAANGYGKAGKGSETGVDGIGDRIAVMMPNVPACPVSLLGVLVAGCTVVN
VNPLYTPRELAAQINDSGARVLFVLENFCHTVAQALPQMPSLERIVVAGPGDLLGLKGRI
VDLVSRRVKRAVPPYTLPAGRTLRFEAVVRAGRGLKRPSVAIEPGDVAFLQYTGGTTGIA
KAAMLTHRNIMANVEQSRAWFRGPTGEGDGHVAVTALPLYHIFALTACFLFFFRLGGCCL
LIPNPRDLDGFVKTLSRTRFTNFAGVNTLFNALNNHPKIGTVDFSNVEYVVGGGMAVQSA
VAARWKAITGQTILEGYGLSETSPVVSVNPLGLADWTGTIGYPLPSTEVTIRAEDGTVLP
FGVPGELCVRGPQVMAGYWNRPEETRAAMTADGFFRTGDVAVMTPDGQIRIVDRMKDMIL
VSGFNVYPNEVEDVLATHPAVVECAVVGAPCGESGEMVVAHVVLRDPSVEPDALRAHARA
SLTGYKVPRRIVIQDSLPKTNVGKVLRRALRDSGPAAG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggaccggagcgcggagcgtccttggctggccgcctatccccccggcattccc
gccgacatcgacgtcgattccgtcggcacggtggtcgatctgttcgaccgcagcgtgctg
cgcttcgctgagcgtccggcaatcacctgcttcggcgcgagcctgcgctaccgcgaggtc
ggcgccgcggcgcaggcggtggcggcgtggctcgccgccaacggctacggcaaggccggc
aaaggcagcgagacgggtgtggacggcatcggcgaccgcatcgcggtgatgatgcccaac
gtcccggcctgtcccgtctcgctgctcggcgtgctggtggcgggctgcaccgtcgtcaac
gtcaacccgctctacaccccgcgcgaactcgccgcgcagatcaacgattccggcgcccgc
gtcctcttcgtgctggagaacttctgccacacggtcgcgcaggcgctgccgcagatgccg
agcctggagcggatcgtcgtggcgggccccggcgacctgcttgggctgaagggacggatc
gtcgatctcgtctcgcggcgggtgaagcgggcggtgccgccctacaccctgccggccggg
cggaccctgcggttcgaggcggtggtgcgggcgggccgcggcctcaagcgcccctcggtc
gcgatcgagcccggtgacgtcgccttcctgcaatataccggcggcaccaccggcatcgcc
aaggcggcgatgctgacccaccgcaacatcatggccaatgtcgagcagagccgggcgtgg
ttccgcggcccgacgggggagggggacggacacgtggcggtgacggcgctgccgctctac
cacatcttcgcgctgacggcctgcttcctgttcttcttccggctcggcggctgctgcctg
ctgatcccgaacccgcgcgatctcgacggcttcgtgaagacgctcagccgcacccgcttc
accaacttcgccggggtgaacacgctgttcaacgcgctgaacaaccacccgaagataggc
acggtcgatttctcgaacgtggagtacgtggtcggcggcggcatggcggtgcagtcggcg
gtggccgcccgctggaaggcgatcaccggccagaccatcctcgaaggctacggcctgtcg
gagacctcacccgtggtgagcgtcaacccgctcgggctcgccgactggaccgggacgatt
ggttatccgctgccctcgacggaggtgacgatccgcgccgaggacggcacggtgctgccc
ttcggcgtgcccggcgaactctgcgtgcgcgggccccaggtgatggccggctattggaac
cgcccggaggagacgcgggcggcgatgaccgccgacggcttcttccgcaccggcgacgtg
gcggtgatgacgccggacgggcagatccgcatcgtcgaccggatgaaggacatgatcctc
gtctccggcttcaacgtctacccgaacgaggtcgaggacgtgctcgccacccatccggcg
gtggtcgaatgcgccgtggtcggcgcgccctgcggcgagagcggcgagatggtcgtcgcc
cacgtagtcctgcgcgatccgtccgtggagccggacgcgctcagggcgcatgcccgcgcg
agcctcaccggctacaaggtgccccgccggatcgtgatccaggacagcctgccgaagacc
aatgtcggcaaggtgctgcgccgggccctgcgggacagcgggccggcggcgggctga
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