Entry |
|
Symbol |
soxB
|
Name |
(GenBank) sarcosine oxidase, beta subunit
|
KO |
|
Organism |
mdi Methylorubrum extorquens DM4
|
Pathway |
mdi00260 | Glycine, serine and threonine metabolism |
|
Module |
mdi_M00975 | Betaine degradation, bacteria, betaine => pyruvate |
|
Brite |
KEGG Orthology (KO) [BR:mdi00001]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
METDI4700 (soxB)
Enzymes [BR:mdi01000]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
METDI4700 (soxB)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
METDI4700 (soxB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4585534..4586787
|
AA seq |
417 aa
MRRFSLTSLLSESLRGHTGWGRQWRAPEPKPRYDVVIVGGGGHGLATAYYLATVHGITNV
AVLEKGWIGGGNTGRNTTIIRSNYLYDESAAMYEHALKLWEGLSQELNYNIMFSQRGVLM
LAHNIHDVQSFKRHVYANRLNGIDNEWLSKEECKEFCPPLDISGSLRYPVLGGALQRRAG
TARHDAVAWGYARGADNRGVDIIQNCEVTGIRRDASGAAVGVETTRGFIGAGRIGVVAAG
HTSTLMSMAGVSMPLESYPLQALVSEPVKPCFPCVVMSNAVHAYLSQSDKGELVIGAGTD
QYTSYSQQGGLHITTHTLDAICELFPQFTRMRMLRSWGGIVDVTPDRSPIIGKTPVPNLF
VNCGWGTGGFKATPGSGHVFAHTLATAEPHAINAPFTLDRFRTGRLIDEAAAAAVAH |
NT seq |
1254 nt +upstreamnt +downstreamnt
atgcgccgcttctccctcacgtcgctgctctccgaatccctgcggggccataccggctgg
ggccgccagtggcgtgcccccgagcccaagccccgctacgacgtcgtcatcgtcggcggc
ggcggccatggcctcgcgaccgcctattatctcgccaccgtgcacggcatcaccaacgtg
gcggtgctggagaagggctggatcggcggcggcaataccggccgcaacaccacaatcatc
cgctccaactacctctacgacgagagcgcggcgatgtacgagcacgcgctcaagctctgg
gaggggctcagccaagagctgaactacaacatcatgttctcccagcgcggcgtgttgatg
ctcgcgcacaacatccacgacgttcagagcttcaagcgccacgtctacgccaaccgcctc
aacggcatcgacaacgagtggctctcgaaggaagagtgcaaggaattctgcccgccgctc
gatatctcggggagcctacgctaccccgtgctcggcggcgcgctccagcgccgggccggc
accgcccgccacgacgcggtggcctggggctatgcccgcggcgccgacaaccgcggcgtc
gatatcatccagaattgtgaggtcaccggcatccgccgcgatgcctccggtgcggcggtg
ggcgtcgagacgacccgcggcttcatcggcgccggccggatcggcgtggtcgccgccggc
cacacctcgacgctgatgtcgatggccggcgtgtcgatgccgctggagagctacccgctc
caggctttggtctccgagccggtcaagccgtgcttcccctgcgtggtgatgtcgaacgcg
gtccacgcctacctgtcgcaatccgacaagggcgagctggtgatcggtgcgggcaccgac
cagtacacctcctacagccagcagggtggcctccacatcaccacccacacgctcgacgcg
atctgcgagctgtttccgcaattcacccggatgcggatgctgcgctcctggggcggcatc
gtcgacgtgacgccggatcgctcgccgatcattggcaagaccccggtgccgaacctgttc
gtcaattgcggctggggcaccggcggcttcaaggcgacgccgggctcgggccacgtcttc
gcccacacgctcgcgacggctgagccgcacgcgatcaacgcgcccttcaccctcgaccgg
ttccgcaccgggcgcctcatcgacgaggccgccgccgcggccgtcgcgcactga |