Methylorubrum extorquens DM4: METDI4702
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Entry
METDI4702 CDS
T00947
Symbol
soxA
Name
(GenBank) sarcosine oxidase, alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00260
Glycine, serine and threonine metabolism
mdi01100
Metabolic pathways
Module
mdi_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
METDI4702 (soxA)
Enzymes [BR:
mdi01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
METDI4702 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
METDI4702 (soxA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
FAD_binding_2
HI0933_like
DAO
GIDA
Pyr_redox
FAD_binding_3
Pyr_redox_3
Thi4
Fer2_BFD
Lycopene_cycl
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
CAX26324
UniProt:
C7CH24
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All DBs
Position
4587105..4590092
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AA seq
995 aa
AA seq
DB search
MAQPFRLSRGGRIDRTRPIVFEFNGKPVHGFAGDTVASALLANGIHLVGRSFKYHRPRGI
LSHGPDEPSALLSVDRGPGRIDPNNRASVVEARSGLRTTSQNHWPSLEFDVGAVNDLLSP
VFVAGFYYKTFMWPRKFWDRVYEPFIRAAAGLGKAPTVADPDRYANRHAHCDVLIVGAGP
AGLAAALAAARTGKRVILADEGAEPGGTLLHDTTSQIDGRPAADWLAETLAELDARENVI
LLPRTTAFGYYNHNHVAMTERVTDHLSSAAGQAPRERLWQVRAEQVVLAGGSHERPLVFA
DNDRPGILLAESVRVFLNRYGVAPGRKLVFATSSASAYQAALDARAAGLDVTLVDLRLEA
DCGPELARLRSAGVEVLTGHTVVGSKGRKRVTGLIVAPVGSDGRCGGRRILPCDCVGMSG
GWTPAVHLFSQSRGKLAYDEGIDAFVPSRSAQDERSAGAARGSYDLAACLAEGFAAGAAA
AGSDARQDFRATETLTGFQPVRIMPTDANPTKVRAFVDYQNDVTAKDIKLAVREGFQSIE
HVKRYTTTGMATDQGKTSNMNALGIVAGQLDKALPAVGTTTFRPPYTPVTFGALVGPARH
ALFDPIRTTPIHEWAEAHGALFENVALWRRAWYFPKAGEDLHAAVARECKAVREGVGIFD
ASTLGKIEIVGRDAAEFMNRLYINPWTKLAPGRCRYGLMLKEDGYILDDGVVARVSDTCF
HVTTTTGGAARVLGHMEDYLQTEWPELEVFLTSITEQWAVIALQGPKARAVIAPLVDGID
LSPEAFPHMAMRSGTICGVPTRLFRVSFTGELGFEINVPADHARAVWEAMFEAGRAHGIT
PYGTETMHVLRAEKGYIIVGQETDGTVTPDDVGMAGMIPKAKGDFVGKRSLARPDVVATG
RKQLVGLMTDDPKLVLDEGAQIVTDTHQPIPMRMLGHVTSSYWSANCGRSIALALVEGGR
ERMNGHLFVTTPDGFTRVTVCEPVFFDVQGERINA
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggcacagccgttcagattgtcccgcggcggacgcatcgaccgcacccgccccatcgtc
ttcgagttcaacggcaagccggtccacggattcgccggcgacaccgtcgcctcggcactg
ctggccaacggcatccatctcgtcgggcgctcgttcaagtaccaccgccctcgcggcatc
ctgagccacggccccgacgagccgagcgcgctgctctcggtcgatcgcgggcccggccgg
atcgacccgaacaaccgcgcctccgtggtcgaggcccgctcgggcctgcgcacgacctcg
cagaaccattggccgtcgctcgaattcgacgtcggcgccgtcaacgacctcctgtcgccg
gtcttcgtggcgggcttctactacaagaccttcatgtggccccggaagttctgggaccgg
gtctatgagccgttcatccgcgccgccgccggtctcggcaaggcgccgacggtggccgat
cccgaccgctacgccaaccgccacgcccattgcgacgtgctgatcgtcggcgccggcccg
gcggggcttgctgcggcgctcgccgcggcccgcaccggcaagcgggtgatcctcgccgac
gagggcgcggagcccggcggcacgctcctgcacgacacgacctcgcagatcgacggacgc
ccggcggcggactggctcgccgagacgctggccgagctcgatgcccgcgagaacgtcatt
ctgctgccccgcaccaccgccttcggctattacaaccacaaccacgtggcgatgaccgag
cgtgtcaccgaccacctgtcctccgccgcgggccaagcgccccgcgagcgcctgtggcag
gtgcgggcggagcaggtcgtgctcgccggtggctcccatgagcgccccctcgttttcgcc
gacaacgaccggccgggcatcctgctcgccgagagcgtgcgggtcttcctcaaccgttac
ggcgtggcgccgggccgcaagctcgtcttcgccacgagcagcgcctccgcctaccaagcc
gcgctcgatgcgcgtgcggcgggtctcgacgtcaccctcgtcgatctgcgcctggaagcg
gattgcggaccggagttggcacgcctgcgcagcgctggagtcgaagtgttgaccggccac
accgtggtcggatcgaagggccggaagcgcgtcacgggtctcatcgtggcgcctgtcggg
agcgacggccggtgcggcggccgtcgcattctcccctgcgactgcgtcggcatgtccggc
ggctggacgcccgccgtccacctgttctcgcagtcccgcggcaagctcgcctacgacgag
ggcatcgatgccttcgtgccgagccgttcggcgcaagacgagcgctcggcgggtgcggcc
cgcggcagctacgacctcgccgcctgccttgcggagggctttgccgccggcgccgccgcg
gcgggctccgatgcacggcaggacttcagggcgacggagacgctgaccggcttccagccg
gtgcggatcatgcccaccgatgcgaacccgaccaaggtccgcgccttcgtcgattaccag
aacgacgtcaccgccaaggacatcaagctcgcggtgcgcgagggcttccagtcgatcgag
cacgtcaagcgctacaccacgaccgggatggcgacagaccagggcaagacctcgaacatg
aacgcgctcggcatcgtcgccgggcagctcgacaaggcgctacccgccgtcggcaccacg
accttccggccgccctacaccccggtgaccttcggcgcgttggtgggccccgcccgccac
gccctgttcgatccgatccgcaccacgccgatccacgaatgggccgaggcccacggcgcc
ctgttcgagaacgtcgccctgtggcggcgcgcctggtacttcccgaaggcgggcgaggac
ctgcacgccgcggtcgcccgcgagtgcaaggcggtgcgcgagggtgtcggcatcttcgac
gcctcgacgctgggcaaaatcgagatcgtcggccgggatgcggccgagttcatgaaccgc
ctctacatcaacccctggaccaagctcgcccccgggcgctgccgctacgggctgatgctg
aaggaggacggctatatcctcgacgacggcgtcgtcgcccgcgtctcggacacctgcttc
cacgtcaccactacgaccggcggcgccgcccgcgtgctcggccacatggaggactacctc
cagaccgagtggccggagcttgaagtgttcctgacctcgatcaccgagcaatgggcggtg
atcgcgctgcagggcccgaaggcccgcgccgtgatcgcgcccctggtcgacggcatcgac
ctctcgccggaggccttcccgcatatggcgatgcgctcaggcacgatctgcggcgtgccg
acccggctgttccgggtgtcgttcaccggtgaactcggcttcgagatcaacgtgcccgcc
gaccacgcccgcgcggtctgggaggcgatgttcgaggcgggccgggcccacggcatcacg
ccctacggcaccgagacgatgcacgtgctgcgcgccgagaagggctacatcatcgtcggc
caggagaccgacggcacggtgaccccggacgatgtcggcatggccgggatgatcccgaag
gccaagggggacttcgtcggcaagcgctcgctggcgcgccccgacgtggtcgccaccggc
cgcaagcagctcgtcggcctcatgaccgacgatcccaagctcgtcctcgacgagggcgcg
cagatcgtcaccgatacccatcagccgatcccgatgcgcatgctcggccacgtcacgtcg
agctactggagcgccaattgcggccgctccatcgcgctggccctggtcgagggcggacgc
gagcggatgaacggccatctcttcgtcaccacgccggacgggttcacccgcgtcaccgtc
tgcgaaccggtcttcttcgacgtccagggggagcgcatcaatgcttga
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