Methylorubrum extorquens DM4: METDI4871
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Entry
METDI4871 CDS
T00947
Symbol
gid
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid
KO
K04094
methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:
2.1.1.74
]
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdi03016
]
METDI4871 (gid)
03036 Chromosome and associated proteins [BR:
mdi03036
]
METDI4871 (gid)
Enzymes [BR:
mdi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.74 methylenetetrahydrofolate---tRNA-(uracil54-C5)-methyltransferase [NAD(P)H-oxidizing]
METDI4871 (gid)
Transfer RNA biogenesis [BR:
mdi03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
METDI4871 (gid)
Chromosome and associated proteins [BR:
mdi03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
METDI4871 (gid)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIDA
FAD_oxidored
NAD_binding_8
DAO
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
CAX26486
LinkDB
All DBs
Position
complement(4759456..4760928)
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AA seq
490 aa
AA seq
DB search
MPTRIDRAAAWFYSVAMTNPIHIVGGGLAGSEAAWQVAQGGRRVVLHEMRPVRATDAHHT
DGLAELVCSNSFRSDDANGNAVGLLHQEMRSLDSLIMRTADAHQVPAGGALAVDREGFSR
AVTAALEDHPNITIVREEVAGLPPEDWGSTILATGPLTSPALAEAVGTLTGRESLAFFDA
IAPIVHRDSIDMGKAWFQSRYDKAGPGGTGADYLNCPMDREQYEAFVAALIAGEKTAFKE
WEASTPYFDGCLPIEVMAERGPETLRHGPMKPVGLTNPHNPTVKAYAIVQLRQDNALGTL
FNMVGFQTKLRHAEQVRVFRTIPGLENAEFARLGGLHRNTYLDSPRLLDATLRLKARPQL
RFAGQITGCEGYVESAAVGLMAGRYALAEAEGQTLAPLPPTTALGALIGHITGGHVEAPE
EAERNAPRSFQPMNVNFGLFPPLAQMPRNETGKRLRGPEKAALKKRALTDRAREDLAAWM
TGERLPHAAE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacccgcattgatcgcgcggccgcgtggttctattccgttgcgatgacgaacccg
atccatatcgtcggcggtggcctcgccggttccgaagcggcctggcaggtcgcgcagggc
ggccgcagggtcgtgctgcatgagatgcggcccgttcgcgccaccgatgcccaccacacc
gacgggctggccgaactggtctgctccaattccttccgctcggacgacgcgaacggcaac
gccgtcggcctgctgcatcaggagatgcgcagcctcgactcgctgatcatgcgcacggcc
gatgcccaccaagtgcccgcgggcggggcgctcgccgtcgatcgcgaggggttttcgcgg
gccgtcaccgcggcgctggaggatcaccccaacatcaccatcgtccgcgaggaggtcgcc
ggccttccccccgaggactggggttcgaccatcctcgccaccggccccctcacctccccg
gcgctggccgaggccgtcggcacgctgacgggccgggaatcgctcgccttcttcgacgcc
atcgccccgatcgtccaccgcgactcgatcgacatgggcaaggcgtggttccagtcccgc
tacgacaaggccggccccggcggcacgggggcggactacctcaactgcccgatggaccgg
gagcagtacgaggcgttcgtcgccgcgctgatcgcgggggagaagacggcgttcaaggag
tgggaggcctcgaccccctatttcgacggctgcctgccgatcgaggtgatggccgagcgc
gggcccgagaccctgcgccacgggccgatgaagccggtcggcctcaccaacccgcacaac
ccgacggtgaaggcctacgccatcgtccaactgcgccaggacaatgcgctcggcaccctg
ttcaacatggtgggcttccagaccaagctgcgccacgccgagcaggtccgcgtcttccgc
acgattccggggctggagaatgccgagttcgcccggctcggcggcctgcaccgcaacacc
tatctcgacagcccgcgcctgctcgacgcgaccctgcggctgaaggcacggccccagctt
cgcttcgccggccagatcaccggatgcgaggggtacgtcgagagcgccgcggtcgggctg
atggccggccgctacgcgctcgctgaggcggaggggcagacgctcgcccccctgcccccg
acgaccgcgctcggggcactcatcggccacatcaccggcggccacgtcgaggcgcctgag
gaggcggagcgcaacgcaccgcgctcgttccagccgatgaacgtgaatttcgggctgttc
ccgccgctggcgcagatgccgcgcaacgagaccggcaagcgcctgcgcgggcccgagaag
gcggcgctcaagaagcgcgcgctgaccgaccgggcgcgggaagacctcgctgcctggatg
acgggtgagcgacttccgcacgcggcggagtag
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