Methylorubrum extorquens DM4: METDI4898
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Entry
METDI4898 CDS
T00947
Symbol
yliG
Name
(GenBank) putative AdoMet-dependent methyltransferase, UPF0004 family
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdi03009
]
METDI4898 (yliG)
Enzymes [BR:
mdi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
METDI4898 (yliG)
Ribosome biogenesis [BR:
mdi03009
]
Prokaryotic type
ribosomal protein modification factors
METDI4898 (yliG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
CAX26512
UniProt:
C7CI81
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All DBs
Position
4792750..4794096
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AA seq
448 aa
AA seq
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MTATASPSDTKGAAAPRISFVSLGCPKALVDSERILTHLRAEGYELSRRHDGADVVIVNT
CGFLDSAKAESLAAIGEAMAENGRVIVTGCMGAQPEEIREKYPNLLAVTGPQAYESVVAA
VHEAVPPAHDPFLDLIPPQGVKLTPRHYAYLKISEGCNNRCTFCIIPSLRGDLVSRPAGD
VLREAEKLVKAGVKELLVVSQDTSAYGIDTRYASSPWQDREVRARFYDLAKELGELGAWV
RLHYVYPYPHVDEVIPLMAEGKILPYLDMPLQHASPSVLKRMRRPGNQEKQLDRIRRWRE
ICPDLAIRSTFIVGFPGETDAEFEELLDWIREARLERVGCFEYEPVKGATANDLGLLVPP
EVKAERKRRFMEAQSHVSLRLQRAKVGKRLSVIIDEAGPTGARGRSKADAPEIDGSVHVT
SRRPVRPGDIVTVKIERADAYDLHGIAV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaccgcctctccctcggacaccaagggcgccgccgcgccgcggatctccttc
gtgtcgctgggctgccccaaggcgctcgtcgattccgagcgcatcctcacccatctgcgc
gccgagggctacgagctgtcgcgccgccatgacggggcggacgtcgtcatcgtcaacacc
tgcggcttcctcgattcggccaaggccgagtcgctcgctgcgatcggcgaggccatggcc
gagaacggccgggtgatcgtgacgggctgcatgggcgcgcagccggaagagatccgcgag
aagtacccgaacctgctcgccgtcaccggcccccaggcctacgagtcggtggtcgcggcg
gtgcatgaggcggtgccgcccgcccacgatccgttcctcgacctgatcccgccgcaaggg
gtcaagctcaccccgcgccactacgcctatctgaagatttccgagggctgcaacaaccgc
tgcaccttctgcatcatcccgagcttgcgcggcgacctcgtcagccgcccggcgggcgac
gtgctgcgtgaggcggaaaagctcgtcaaagccggcgtgaaggaattgctcgtcgtctcg
caggacacctccgcctacggcatcgacacgcgctacgcgtcgagcccgtggcaggatcgg
gaggtgcgcgctcggttctacgatctggccaaggaactcggcgagctcggggcctgggtg
cggctgcactacgtctacccctacccgcatgtcgacgaggtcatcccgctgatggccgag
ggcaagatccttccctatctcgacatgccgctccagcacgccagcccctcggtgctcaag
cgcatgcgccggccgggcaaccaggagaagcagctggaccgcatccggcgctggcgcgag
atctgcccggatctcgccatccgctcgaccttcatcgtcggcttccccggcgagaccgat
gccgagttcgaggaactgctcgactggattcgcgaggcgcggctcgagcgtgtcggctgc
ttcgaatacgagccggtcaagggcgccaccgccaacgatctcgggctgctggtgccgccg
gaggtgaaggccgagcgcaagcgccgcttcatggaggcacagagccacgtctcgctgcgc
ttgcagcgggcgaaggtgggcaagcgcctgtctgtcatcatcgacgaggcgggcccgacc
ggcgcgcggggccgctccaaggccgacgcgccagagatcgacggcagcgtccacgtcacg
tcgcgccgtcccgtgcggcccggcgacatcgtcaccgtgaagatcgagcgggccgacgcc
tacgatctgcacggcatcgcggtgtag
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