Methylorubrum extorquens DM4: METDI4930
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Entry
METDI4930 CDS
T00947
Symbol
dnaB
Name
(GenBank) replicative DNA helicase (dnaB)
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
METDI4930 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdi03032
]
METDI4930 (dnaB)
Enzymes [BR:
mdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
METDI4930 (dnaB)
DNA replication proteins [BR:
mdi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
METDI4930 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_16
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CAX26544
UniProt:
C7CIB3
LinkDB
All DBs
Position
complement(4827626..4829113)
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AA seq
495 aa
AA seq
DB search
MALPNALTANLETVQPEYRVPPHNIDAEQALLGAIMVNNDAYYRVSDFLLPEHFMEAVHR
QIFEVSVSLIKAGKLATPITLKTYLGDIDLGGVTPMQYLARLAAEATTVINAGEYGRTIY
DLAIRRRLITIGEDLVNGAFEAPVESRPRDQIEATERRLYELAESGKYDGGFQKFSDALT
AAIDMAAKAYQRDGKLSGISTGLTDLDAKMGGLQPSDLIILAGRPAMGKTSLVTNIAFNI
AKAYRGEKQPDGTMQTVNGGIVGFFSLEMSAEQLATRIIAEQSGVPSYKIRRGDIRPEDF
YKITDAARDMQTIPFYIDQTGGISIAQLAARARRLKRQKGLDLLIIDYLQLLSGSGKKSD
NRVQEMTEITTGMKALAKELAVPIIGLSQLSRQVENRDDKRPQLSDLRESGSIEQDADVV
MFVFREEYYVGNKKPREGTEEFFAWEAEMQRVHGKAEVILGKQRHGPTGTVELQFDANIT
RFSNLAQSDRMPEQM
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcccaacgccctcacggccaatctcgagacggtgcagcccgaataccgggtg
ccgccacacaacatcgacgcggagcaggccctgctcggcgcgatcatggtgaacaacgac
gcctattaccgtgtctcggacttcctgctgcccgagcacttcatggaggcggtgcaccgc
cagatcttcgaggtgtcggtctcgctgatcaaggcgggcaagctcgccacgccgatcacg
ctgaagacctatctcggcgacatcgacctcggcggcgtcacgccgatgcagtacctcgcc
cgcctcgcggccgaggcgaccaccgtcatcaacgcgggcgagtacggccgcaccatctac
gatctggcgatccgccgccggctcatcaccatcggcgaggatctggtcaacggcgcgttc
gaggcgcccgtcgagtcccggccgcgcgaccagatcgaggcgaccgagcgccggctctac
gaactcgccgaatccggcaagtacgacggcggcttccagaaattctccgacgcgctgacc
gcggccatcgacatggcggccaaagcctaccagcgcgacggcaagctctcgggcatctcc
acggggctcaccgatctcgacgccaagatgggcggcctgcagccctcggacctcatcatc
ctcgcggggcgcccggccatgggcaagacctcgctcgtgaccaacatcgccttcaacatc
gccaaggcctatcgcggcgagaagcagcccgacggcaccatgcagaccgtcaacggcggc
atcgtcggcttcttctccctcgaaatgtcggccgagcaattggcgacccgtatcatcgcc
gagcagtccggcgtgccctcctacaagatccgccgcggcgacatccgcccggaggacttc
tacaagatcaccgacgccgcccgggacatgcagacgatcccgttctacatcgaccagacc
ggcggcatctcgatcgcccagctcgccgcccgtgcgcgccgcctcaagcgccagaagggt
ctcgacctgctcatcatcgactaccttcagctcctgtccggctccggcaagaagagcgac
aaccgcgtgcaggagatgaccgagatcaccaccggcatgaaggctttggccaaggagctg
gcggtgccgatcatcggcctgtcgcagctctcgcgtcaggtcgagaaccgcgacgacaag
cggccccagctctcggacctgcgcgaatccggctcgatcgagcaggacgccgacgtggtg
atgttcgtgttccgcgaggaatactacgtcggcaacaagaagccgcgcgagggtaccgag
gagttcttcgcctgggaagccgagatgcagcgcgtccacggcaaggccgaggtcatcctc
ggcaagcagcgccacggcccgaccggcacggtggagctgcagttcgacgccaacatcacc
cggttctcgaacctggcgcaaagcgaccggatgcccgagcagatgtga
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