Methylorubrum extorquens DM4: METDI4977
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Entry
METDI4977 CDS
T00947
Symbol
rhlE
Name
(GenBank) RNA helicase
Organism
mdi
Methylorubrum extorquens DM4
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
4_1_CTD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAX26591
UniProt:
C7CJ88
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Position
complement(4877468..4879021)
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AA seq
517 aa
AA seq
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MSFADLGLSDKVLQAVTTAGYTEPTPIQAQAIPHVLARRDVLGIAQTGTGKTAAFTLPML
TMLETGRARARMPRTLILEPTRELAAQVEENFERYGTNHKLNVALIIGGVSFADQDAKLT
RGTDVLIATPGRLLDHFERGKLLLTGVELLVIDEADRMLDMGFIPDIERIVKMVPFTRQT
LFFSATMPPEIERLADMFLHNPQRVEVARPASTATTIEQRLVATGAEGHEKRKVLRHLIR
SASELQNGIIFCNRKRDVAQLQRSLTSHGFNAAALHGDMDQRARMAALDGFRSGEVPLLV
ASDVAARGLDIPAVSHVFNFDVPHHPEDYVHRIGRTGRAGRSGQAFTLASRSDERSLSAI
ESLIGQPIAWLDGDLASVSDEVEGDEPRRRRGSRRAKEAKGGEETKSGGRSTERSAAPSS
ESPRSENRSRGGRRPAAERSRADAPRRDPVREPEPVAAAPTPAPPRELVREPVRSAPERV
RGERRPPRRDEDGETPVGLGSHVPAFLLKPTGFGKSK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgccgatcttggactgagcgacaaggtactccaagccgtcaccacggccggc
tacaccgagccgacgccgatccaggcccaggcgatcccgcatgtgctcgcccggcgcgac
gtgctcggcatcgcccagaccggcaccggcaagaccgccgccttcaccctgccgatgctg
accatgctggagaccggccgcgcccgggctcgcatgccgcgcacgctcatcctggagccg
acccgcgaactcgcggcgcaggtcgaggagaatttcgagcgctacggcaccaaccacaag
ctcaacgtggcgctcatcatcggcggcgtctccttcgccgaccaggacgccaagctcacc
cgcggcaccgacgtgctgatcgcgacgccggggcgcctgctcgaccatttcgagcgcggc
aagctgctgctgaccggcgtcgagcttctcgtcatcgatgaggccgaccgtatgctcgac
atggggttcattcccgacatcgagcgcatcgtgaagatggtgcccttcacgcgccagacg
ctgttcttctccgcgacgatgccgccggagatcgagcggctggccgacatgttcctgcac
aacccgcagcgggtcgaggtggcgcgtcccgcctccaccgccacgaccatcgagcagcgc
ctcgtggcgacgggcgcggagggccatgagaagcgcaaggtgctgcgccacctcatccgc
tcggcgagcgagctgcagaacggcatcatcttctgcaaccgcaagcgcgacgtcgcccag
cttcagcgctcgctgaccagccacggcttcaacgcggcagcactccacggcgacatggac
cagcgcgcccgcatggccgccctcgacggcttccgcagcggcgaggttccgctgctggtg
gcctcggacgtcgccgcgcgcggcctcgatatccccgccgtcagccacgtcttcaacttc
gacgtgccgcaccacccggaggattacgtccaccggatcggacgcaccggtcgcgccggc
cgctcgggccaggccttcaccctcgcgagccgaagcgacgagcgctcgctctcggcgatc
gagagcctgatcggtcagccgatcgcctggctcgacggcgatcttgccagcgtctccgac
gaggtggagggcgacgagccgcgccgccgccgcggcagccgccgggccaaggaagccaag
gggggcgaggaaaccaagagcggcgggcgcagcaccgagcggagtgccgccccgtcgagc
gaaagcccccgcagcgagaaccgctcccgcggaggccgccgtccggccgccgagcgcagc
cgcgccgacgcgccccggcgagacccggtgcgtgagccggaaccggttgcggccgcccct
acccctgcccctccccgcgagttggtccgcgagcccgtccggagcgcgcccgaacgcgtg
cgcggcgagcgtcgtcccccgcggcgcgacgaggacggcgagacgccggtcggcctcggc
tcgcacgtcccggccttcctgctgaagccgaccgggttcgggaagagcaagtag
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