Methylorubrum extorquens DM4: METDI5068
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Entry
METDI5068 CDS
T00947
Name
(GenBank) Hypothetical protein; putative DNA-binding motif HTH; putative transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdi03000
]
METDI5068
Transcription factors [BR:
mdi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
METDI5068
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DUF7317
Motif
Other DBs
NCBI-ProteinID:
CAX26683
UniProt:
C7CJI0
LinkDB
All DBs
Position
4981780..4982682
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AA seq
300 aa
AA seq
DB search
MSVPFVNASVQGDLSAPPDRIFGQIPASGLDGIAFLDFAYETAGFSTHRVGGLLVGTWHG
GWYGLSRTTLTFSDGPTGNEPCDERTGEAFVLRGPGYAGRTLWSGPCRGRYLAFMPAAVE
RMIEAPLSHLRIDSITCDLAERMTVSHLLAALGQAASGHDSAADALLVDSVALAVLRASG
ALSSPPARKSAALTARQARRVRDLVAERIDAPLSLGEMAAVAGLSEGYFVRAFKGTFGVT
PYQYVLRERVTLAQSLIRSGTVSLSEAALRAGFPDARRMGRTFRKMIGRSPTEATRLQRA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttccgttcgtcaacgcctcggtgcagggcgatctcagcgccccgccggaccga
attttcggccagatccccgccagcggcctcgacggcatcgccttcctcgatttcgcctac
gagacggcgggtttcagcacgcaccgggtcggtggccttctcgtcggcacctggcatggc
ggctggtacggcttgagccggaccacgctcaccttcagcgacggcccgaccggcaatgag
ccctgcgacgagcgcaccggcgaggccttcgtcctgcgcgggcccggctatgccggccgc
acgctctggagcgggccatgccgcgggcgctatctcgccttcatgcccgccgcggtggag
cggatgatcgaggcgccgctctcgcatctccggatcgattcgatcacctgtgatctcgcc
gagcggatgaccgtctcccacctcctggcggccctggggcaggcggccagcggccacgac
agcgccgcggacgcgcttctggtcgacagcgtggcgctcgcggtgctgcgcgcctccggc
gccctgtcgagcccgcccgcccgcaagagcgcggcgctcaccgcccggcaggcgcggcgg
gtgcgcgacctcgtcgccgagcggatcgatgcgcccctgtcgctcggggagatggcggcg
gtggcgggcctcagcgagggctatttcgtgcgcgccttcaagggcaccttcggcgtgacg
ccctatcaatatgtgttgcgcgagcgcgtgacgctggcccagtcgctgatccgctccggc
accgtctccttgagcgaggcggccctgcgcgcgggctttcccgatgcgcggcggatgggg
cggaccttccgcaagatgatcgggcgctcgccgacggaagcgacccggctgcagcgggcc
tga
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