Methylorubrum extorquens DM4: METDI5091
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Entry
METDI5091 CDS
T00947
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
METDI5091 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdi03016
]
METDI5091 (trmU)
Enzymes [BR:
mdi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
METDI5091 (trmU)
Transfer RNA biogenesis [BR:
mdi03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
METDI5091 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
QueC
Arginosuc_synth
DUF7411
NAD_synthase
ThiI
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
CAX26706
UniProt:
C7CJK3
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All DBs
Position
5005509..5006741
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AA seq
410 aa
AA seq
DB search
MRPDPTVRRAPEGSANGRHPAPSPAMNSLDLPKPPHETRVVVAMSGGVDSSVVAGLLKRE
GYDVVGVTLQLYDHGAATHRKGACCAGRDIHDARAVAETLGIPHYVLDYEDRFRESVIDR
FAESYLSGETPIPCVECNRSVKFRDLLGLARELGAEALATGHYVASRARPEGGRALYRAL
DPARDQSYFLYATTPEQLAYLRFPLGERPKDETRALARELGLAVADKADSQDICFVPQGG
YADVIAKLRPEATRPGEIVDLDGRRLGEHEGIIHYTVGQRRGLKLSAGEPLYVVRLEPET
ARVVVGPRAALATRRIRLTDLNWLGDGAPEDIVERPVAVRVRSTREPRPARLSWNAAEAC
AEVELLVPEDGVSPGQACVIYADDDPRAQVLGGGTIRRIGALQAGAAEAA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccggaccccacggtccggcgcgcgcccgaaggctccgccaacggccggcacccg
gccccatcaccggccatgaactcgctggatctcccgaagcccccgcacgagacgcgcgtc
gtcgttgccatgtcgggcggcgtcgattcgtcggtcgtggccggcctgctgaagcgtgag
ggctacgacgtcgtcggcgtcacgctccagctctacgatcacggcgcggcgacccatcgc
aagggcgcctgctgcgccggccgcgacatccacgatgcgcgggcggtggccgagacgctc
ggcattccacattacgtcctcgactacgaggaccgcttccgcgaatcggtgatcgaccgc
ttcgccgagagctacctctcgggtgagacgccgatcccttgcgtcgagtgcaaccgctcg
gtgaagttccgcgacctgctcggcctcgcccgcgagctcggggcggaggctttggcgacg
ggccattacgtggccagccgggcgcggccggagggcggacgcgcgctctaccgcgccctc
gatccggcccgcgaccagagctacttcctctacgccacgaccccggagcagctcgcctat
ctgcgctttcccctgggcgagcggcccaaggacgagacccgtgctctggcacgggaactg
ggcctcgcggtcgccgacaaggccgacagccaggacatctgcttcgtgccccagggcggc
tatgccgacgtgatcgccaagctccggccggaggcgacccgccccggcgagatcgttgat
ctcgacggccggcgcctcggcgagcacgagggcatcatccattacacggtgggccagcgc
cgcggcctcaagctctcggccggcgaaccgctctacgtggtgcggctggagcccgagacc
gcccgcgtcgtggtcggcccccgcgccgcgctcgccacccgccgcattcgcctcaccgat
ctcaactggctcggcgacggcgcgccggaggacatcgtggagcggcccgtggccgtgcgc
gtgcgctcgacccgcgagccgcggcccgcgcgcctgtcgtggaatgcggccgaggcctgc
gccgaggtcgaactgctcgtccccgaggacggggtctcgccgggccaggcctgcgtgatc
tacgccgatgacgacccgcgcgcgcaggtgctcggcggcggcaccatccggcgcatcggc
gcgttgcaggcaggcgccgccgaggccgcctga
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