Methylorubrum extorquens DM4: METDI5104
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Entry
METDI5104 CDS
T00947
Name
(GenBank) RecA-superfamily ATPase implicated in signal transduction
KO
K08482
circadian clock protein KaiC
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
METDI5104
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DnaB_C
AAA_16
RecA
NPHP3_N
AAA_22
NACHT
AAA_7
AAA
Sigma54_activat
IstB_IS21
AAA_19
nSTAND3
DUF7125
SLFN-g3_helicase
CbiA
ATP-synt_ab
TrwB_AAD_bind
MEDS
divDNAB
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
CAX26719
UniProt:
C7CKE9
LinkDB
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Position
complement(5020623..5022350)
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AA seq
575 aa
AA seq
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MASESASPPEGTSKDASKSAPALAKVATGIDGFDTITFGGLPKGRPSLVCGAAGCGKTLF
ATTFLVNGATRFGEPGVFMSFEERAEDLVANVASLGYDLDGLVAQGKLAIDHVRVERSEI
EETGEYDLEGLFIRLGFAVDSIGAKRIVLDTIETLFAGFSDETVLRAELRRLFGWIKDRG
LTAIITGERGDGQLTRQGMEEYVSDCVVLLDNRVEDQITTRRLRVVKYRGSAHGTNEYPF
LIDAEGISVLPVTAADLDYTIAEGVASTGIPGLDAMLEPGGFHRGTSILVSGESGTGKTM
ITSSMIAAACARGERCMSFVFEESGDQIIRNARSIGLDLARHVEAGLLRFEAARPSLYGL
EMHLARMHRDIDRFAPTVVVVDPLSALRGPPAELQATMLRMVDMLKSRGITAVFTSLRED
GSLDHDSNIGVSSLMDAWIKLLNIEANGERSRTLYVIKARGMRHSNQVREFSMSGDGIAL
VEAYIGPAGVLTGTARVVQEAEEAAAVLRREQESRRRRREAERRRQSLERQIDELRATLE
AAAEEEAVLLSEDEMREAMLTSERRILSTRRGGTR
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
ttggcgtctgaatccgcgagcccgcccgaaggcacttccaaggacgcttcgaagagcgct
cccgcgctcgcgaaggtcgccaccggcatcgacggcttcgataccatcaccttcggcggc
ctgccgaaggggcggccctcgctggtttgcggcgcggccggctgcggcaagacgttgttc
gccaccaccttcctcgtcaacggcgcgacccgcttcggcgagcccggcgtgttcatgagc
ttcgaggagcgcgccgaggatctcgtcgccaacgtcgcctccctcggctacgacctcgac
gggctggtggcgcagggcaagctcgccatcgaccacgtccgggtggagcgcagcgagatc
gaggagaccggcgagtacgacctcgaaggcctgttcatccgcctcggcttcgcggtggac
tcgatcggcgccaagcgcatcgtgctcgacacgatcgagaccctgttcgcgggcttttcc
gacgagacggtgctgcgggccgaactccgccgcctgttcggctggatcaaggaccggggc
ctgaccgcgatcatcaccggcgagcgcggcgacggccagctcacccgccaggggatggag
gaatacgtctccgactgcgtggtgctgctcgacaaccgcgtcgaggaccagatcacgacc
cggcgcctgcgcgtggtgaagtatcgcggctcggcccacggcaccaacgagtacccgttc
ctgatcgatgccgagggcatcagcgtcctgccggtcacggcggccgacctcgactacacc
atcgccgagggcgtggcctccaccggcatccccggcctcgacgcgatgctcgaacccggc
ggcttccaccgcggcaccagcatcctcgtgtcgggcgagtccggcaccggcaagaccatg
atcacgtcgagcatgatcgccgcggcctgcgcgcgcggcgagcgctgcatgtccttcgtg
ttcgaggagagcggcgaccagatcatccgcaacgcccgctcgatcggcctcgaccttgcc
cgccatgtcgaggcgggcctgctgcgcttcgaggcggcgcgtccgagcctctacggcctg
gagatgcatctggcgcgcatgcaccgggacatcgaccgcttcgcgcccaccgtggtggtg
gtcgatccgctctcggcgctgcgcggcccgccggccgagcttcaggcgacgatgctgcgc
atggtcgacatgctgaagagccgcggcatcaccgcggtgttcaccagcctgcgcgaggat
ggcagcctcgaccacgacagcaatatcggcgtctcctcgctgatggatgcctggatcaag
ctcctcaacatcgaggccaacggcgagcgctcgcgcacgctctacgtcatcaaggcccgc
ggcatgcgccactcgaaccaagtgcgcgagttcagcatgtcgggcgacggcatcgccctc
gtcgaggcctatatcggccccgcgggcgtgctgacgggcaccgcccgcgtcgtgcaggag
gcggaggaagccgccgccgttctgcgccgcgagcaggagagccgccgacggcggcgcgag
gcggagcggcggcgccagtcgctggagcgccagatcgacgaactgcgcgccaccctggaa
gccgcggcagaggaagaggcggtgctgttgagcgaggacgagatgcgcgaggcgatgctg
acgagcgagcggcgcatcctctccacccgccggggaggcacgcgatga
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