Methylorubrum extorquens DM4: METDI5118
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Entry
METDI5118 CDS
T00947
Name
(GenBank) hypothetical protein
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
METDI5118
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Malectin
Malectin_like
Motif
Other DBs
NCBI-ProteinID:
CAX26733
UniProt:
C7CKG3
LinkDB
All DBs
Position
5033142..5038703
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AA seq
1853 aa
AA seq
DB search
MADVTFSQSTLAGYSGLASALQWGPDGRLYVAERFGSIKALTVAQQGNGYVVTNTESIDL
ILNLPNHNDDGTLNASLKERQVTGILVTGTADNPVLYVTSSDPRIGAGNGGEDTNLDTNS
SIISRLTFDSVTDTWKKVDLVRGLPRSEENHSANGMAISPDGKTLYVAVGGNTNAGAPSN
NFAGLPEFAYAAAVLKVDLTALDAMTLKNPNGLNPYLYDLPTLDDPYRPNNGTAGNENPD
GSDVSGPFGGRDGFNMAKITADSPVQIYSPGYRNAYDVLLTSDGKMFTYDNGANNGWGGR
PSDAAGNVVTNQNQIPLNTADQDGGTKRLNYDQLHEITGEGYYGGHPNLVRAVGGQAGWL
LTPGAGVTGATFLPHGSAGLPADFDSVIPAGTADPRESVFFEGGISDGALDTGQGSLNGL
AEYTASTTWATADGGTTSIKGAILVTDLAGYLHIIPRNASGGVDTAVGAAGQIVAADKQV
VPMGGGAPLGIDAVGDGKPFAGTVWVTTLADGNIKVLTPGPTNPQNLDLDGDGINNTLDP
FALDPDNGTAGTDVISGGETVVFNFESGSLPGTFGGSGLTGAMINGLDPFLDGGLYTSAN
IIAGGAGGVIQLKNVQEGDFTEGNNTLKDALQAGVTFDDSVATANVTMTMANWIPNATSN
GGFPSAGLQIGTGDQDNFIKLVLGGRGESAGGKYTSAIFETSMENLGVAQTSAVTNNALL
SATSASWVQLRLAVNLETNTVTPYWRFGTGAVSSATDANAAFTAGTSLSVPSGSALLKAI
QGDYTVGGKASGMAVGLLATSNDGEAFTADFDGVTITTTAKSGTTNPVVAAINTGGGALT
QDGIGFSADQYFTGGATFIDSTGGNGLQSAFTNTVYQTERYGNFSYAIPVASTSQAYTVE
LRFGELWWSNPGQRVFDVTLEGQTILNDLDILAQTGSFNTPYTYVSGPITAGANGTLDLQ
FANGIDNAKLSGIVVRQVSGGGGTDMTKPTVGPFTVQAPVAGDASASVTVVYNDASGINL
ASITAADIAVTGPGATGAITLQSKTSTSATSATATYIVAAPTGGWTNGQYTATVKTGEVS
DASPAANTNLAASQLFSVQTSSAGGIVAAINAGGAALIQDGISFSADQYFTGGATFIDST
GGNGLQSVFTNTVYQTERYGNFSYAIPVASASQAYTVELRFGELWWSNPGQRVFDVSLEG
QTVLNDLDIVAQTGSFNTPYSYVSGPITAGANGTLDLQFANGIDNAKLSGIIVRQANGGG
NVDTTGPSVAGPFVIQGPSTPTASASVTVIYNDASGINLDSIGASDITMTGAGPIGAITL
QSKAATSATSATATYLVAAPAGGWINGEYITTVKAGEIADASPAGNTNAASGQGSSFQPN
VPVGIVAAINAGGGAVSQDGISFSADQYFTGGATFADSTGGNGLQTAFGGTVYQTERYGN
FSYAIPVASATQSYTVELRFAELWWSNPGQRVFDVTFEGQTILNDLDILAQTGNFNTPYT
FVSGPVIAGANGTLDLQFINGLDNAKLSGIVVRQVTGGADATAPTVGSFDVAAPASAAGQ
ASVTVVYNDTSGIDLASIGASDLAVTGAGAVGAISLQSKATLSATSATATYLVAAPAGGW
ADGSYTATVRAGEVADASPSLNTNAATSHAFTIDVTPGADTLVMAINSGGAAHTRADGTV
FEADTAAAPHRFYVAGQDGNATYSDGDPIAGTTDDALYQNQRFGWASASTTDADDGRFGY
AIKNADGSALASGSYEVILHFAEIYNQPDDPGGLSGAGQRQFNLGIEGTTVANYDIWAAA
TAGATATTLTRTVSVTDGTLDLAFWQGAAENPTVAAIEVWKVNPASVQDGLLV
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtcacgttttctcagtcaacacttgccggttactcggggttggcctcggct
ctgcaatggggcccggacggacggctctacgtcgccgagcggttcggcagcatcaaggcc
ctgacggtcgcgcagcagggcaacggctacgtcgtcaccaacacggaatcgatcgacctc
atcctcaacctgcccaaccacaacgacgacggcacgctgaatgcgagcctgaaggagcgg
caggtcaccggcatcctcgtcaccggcaccgccgacaaccccgtcctctacgtcacctcc
agcgacccgcgcatcggcgccggcaatggcggcgaggacaccaatctcgacaccaattcg
tcgatcatctcgcgcctcaccttcgattccgtgaccgatacgtggaagaaggtcgatctc
gtgcgcggcctgccccgctcggaggagaaccactccgccaatggcatggcgatctcgccc
gacggcaagacgctctacgtggcggtcggcggcaacaccaatgccggcgcgccctccaac
aacttcgccggcctgccggaattcgcctacgcggcggccgtgctcaaggtcgatctcacg
gcgctcgacgccatgacgctgaagaacccgaacgggctcaatccctacctctacgacctg
ccgaccctcgacgatccctaccgccccaataacgggacggccggcaacgagaacccggac
ggctcggacgtcagcggcccgttcggcgggcgcgacgggttcaacatggccaagatcacc
gccgacagcccggtgcagatctactcgcccggctaccgcaacgcctacgacgtgctgctg
acctccgacggcaagatgttcacctacgacaacggcgccaacaatggctggggcgggcgc
ccgtcggatgccgccggcaacgtcgtgaccaaccagaaccagatcccgctcaacacggcc
gatcaggacggcggcaccaagcggctcaactacgaccagctccacgagatcacgggggag
ggctattacggcggccatcccaacctcgtgcgggcggtgggcggccaagccggctggctg
ctgacgccgggggcgggcgtcaccggtgcgaccttcctgccccacggcagcgccggcctg
cccgccgatttcgactcggtgatcccggccggcaccgccgacccgcgcgagagcgtgttc
ttcgagggcggcatcagcgacggggcgctcgataccggccagggctcgctcaacgggctg
gccgaatacaccgcgtcgaccacctgggcgacggccgacggcggcaccacgagcatcaag
ggcgccatcctcgtcacggatctggcgggctatctccacatcatcccgcgcaatgcctcg
ggcggggtcgacaccgctgtcggcgccgcgggccagatcgtggcggcggacaagcaggtc
gtgccgatgggcggcggcgccccgctcggcatcgatgcggtcggcgacggcaagccgttc
gccggcaccgtctgggtcacgaccctggccgacggcaacatcaaggtgctgaccccgggc
cccaccaacccgcagaacctcgacctcgacggcgacgggatcaacaacacgctcgacccc
ttcgccctcgaccccgacaacggcaccgcgggcaccgacgtgatctccggcggcgaaacg
gtcgtgttcaacttcgaatccggctcgcttcccggcacgttcggcggcagcgggctcacc
ggcgcgatgatcaacgggctcgacccgttcctcgacggcggcctctacacctcggccaac
atcatcgcgggcggcgcgggcggcgtcatccagttgaagaacgtgcaggagggcgacttc
acggaaggcaacaacaccctcaaggacgcgctccaggccggcgtcaccttcgatgacagc
gtggcgaccgccaacgtcaccatgacgatggcgaactggattccgaacgccacgagcaac
ggcggcttcccctcggcgggcctgcagatcggcacgggagaccaggacaacttcatcaag
ctggtgctcggcgggcgcggcgagagtgcggggggcaagtataccagcgcgatcttcgag
acctcgatggagaatctcggcgtcgcccagaccagcgcggtcaccaacaacgcgctcctg
agtgcgacgagcgcgagctgggtgcagctgcgcctcgcggtcaatctcgagaccaacacg
gtgacgccgtactggcgcttcggcaccggcgcggtctcctccgccaccgacgcgaacgcc
gccttcaccgccggcaccagcctgagcgtgccaagcggcagcgcgctactgaaggcgatc
cagggcgactacaccgtcggcggcaaggcgagcgggatggcggtgggcctgctcgccacc
tccaacgacggcgaggccttcaccgccgatttcgatggggtcaccatcaccaccaccgcc
aaatcgggcaccacgaacccggtcgtcgcggcgatcaacaccggcggcggggcgctgacg
caggacgggatcggcttctcggccgaccagtacttcaccggcggcgccaccttcatcgac
agcaccggcggcaacggcctgcaatcggccttcaccaacaccgtctaccagactgagcgc
tacggcaatttcagctacgcgatccccgtggccagcacgagccaagcctatacggtcgag
ctgcgcttcggcgaattgtggtggagcaatccgggccagcgcgtcttcgacgtcacgctc
gaaggccagaccatcctcaacgacctcgacatcctggcccagaccggcagcttcaacacg
ccctatacctacgtctcgggcccgatcaccgcgggcgccaacggcacgctcgacctgcaa
ttcgccaacggcatcgacaacgccaagctcagcggcatcgtcgtacgccaagtgagcggg
ggcggcggcaccgacatgaccaagccgacggtcgggcccttcacggtccaggcgcccgtg
gcgggggacgcgagtgccagcgtcacggtggtctacaacgacgcctcggggatcaacctt
gccagcatcaccgcggccgacatcgcggtgacgggccccggcgcgaccggggcgatcacg
ctgcaatccaagacgagcaccagcgcgacctcggccaccgccacctacatcgtcgccgcc
cccaccgggggctggaccaacggccagtataccgccaccgtcaagaccggcgaggtgtcc
gatgcgagcccggcggccaacaccaacctcgcggcctcccagctcttctcggtccagacc
agcagcgcgggcgggatcgtcgcggcaatcaatgccggcggcgcggcgctgatccaggac
gggatcagcttctcggccgaccagtacttcaccggcggcgccaccttcatcgacagcacc
ggcggcaacggcctgcaatcggtcttcaccaacaccgtctaccagaccgaacgctacggc
aatttcagctatgcgatccccgtggccagcgcgagccaggcctacacggtcgagctgcgc
ttcggcgaactctggtggagcaatccgggccagcgcgtcttcgacgtgtcgctggagggt
cagaccgtcctcaacgacctcgacatcgtggcccagaccggcagcttcaacacgccctac
agctacgtctcgggcccgatcacggcgggcgccaatggcacgctcgacctgcaatttgcc
aacggcatcgacaacgccaagctcagcggcatcatcgtgcggcaggcgaacgggggcggg
aacgtcgacacgacgggaccgtcggtggccggccccttcgtgatccaggggccatcgacc
ccgaccgcgagtgccagcgtcacggtgatctacaacgacgcctcggggatcaatctcgac
agcatcggggcgagcgacattacgatgacgggtgccggtccgatcggggcgatcacgctt
caatcgaaggcggccacgagtgccacctcagccaccgccacttatctggtcgccgcgcca
gccggcggttggatcaatggggagtacatcacaaccgtgaaggctggggaaatcgccgat
gcaagtcccgccgggaacaccaacgccgcctccggccaaggctcgtcgttccagccgaat
gttccggtcgggatcgtcgcggcgatcaatgcgggcggaggcgcggtgagtcaggacggg
atcagcttctcggcggaccagtacttcaccggcggcgccaccttcgccgacagcacgggt
ggcaatggcctgcagacggccttcggcggcaccgtttaccagaccgagcgctacggcaat
ttcagctacgccatccccgtcgccagcgcgacgcagtcctacacggtcgagctgcgcttc
gccgaactctggtggagcaatcccggccagcgggtgttcgacgttacgttcgaaggccag
accatcctcaacgacctcgacatcctggcccagaccggcaacttcaacacgccctatacc
ttcgtctcgggcccggtcatcgcgggcgccaacggcacgctcgacctgcagttcatcaac
ggcctggacaacgccaagctgagcggcatcgtcgtgcggcaggtgaccggcggcgccgac
gcgacggcgccgaccgtcggctccttcgatgtcgcggcgcccgcctccgccgcgggccaa
gcgagcgtgacggtggtctacaacgacacctcgggaatcgatctcgccagcatcggggcg
agcgatctcgcggtgacgggagcaggcgcggtcggggcgatcagcctgcaatcgaaggcg
acgttgagcgccacctcggccaccgccacctacctcgtcgccgcgccggcgggcggctgg
gccgacgggtcgtacaccgccacggtgagagccggggaggtcgccgatgcgagcccctcc
ctcaacaccaacgccgccacctcgcacgccttcaccatcgacgtgacgcccggtgccgac
accctcgtcatggccatcaattccggcggggcggcccatacccgtgcggacgggacggtg
ttcgaggccgacacggcggccgccccccaccgcttctacgttgccggccaggacgggaac
gcgacctattccgacggcgatccgatcgccggcaccaccgacgacgcgctctaccagaac
cagcgcttcggctgggccagcgcctcgaccacggatgccgatgacggacgcttcggctat
gcgatcaagaacgcggatggcagcgcgctggcctccggttcctacgaggtgatcctgcac
tttgccgagatctacaatcagcccgacgatccgggcggcctcagcggggcgggccagcgc
cagttcaacctcggcatcgagggcaccacggtcgccaactacgacatctgggcggcggca
acggcgggggcgaccgcgacgaccctgacgcggacggtctcggtcaccgacgggacgctc
gacctcgccttctggcagggggcggccgagaatccgaccgtggcggcgatcgaggtgtgg
aaggtcaatcccgcctcggttcaggacggcctcttggtctaa
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