Methylorubrum extorquens DM4: METDI5283
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Entry
METDI5283 CDS
T00947
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
METDI5283 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdi03400
]
METDI5283 (mutS)
DNA repair and recombination proteins [BR:
mdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
METDI5283 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_II
MutS_IV
AAA_29
PspA_IM30
Motif
Other DBs
NCBI-ProteinID:
CAX26896
UniProt:
C7CLP7
LinkDB
All DBs
Position
complement(5214738..5217524)
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AA seq
928 aa
AA seq
DB search
MPGASGAASLGFMSRPQRSQPLERRAQAADTVTSSPLDIPGATPMMAQYIEIKAANPDCL
LFYRMGDFYELFFEDAEIASRALGIVLTKRGKHGGADIPMCGVPLERADDYLHRLIALGH
RVAVCQQTEDAAEAKKRGPKSVVRREVIRLVTPGTLTEDRLLDPTRANLLLAIGRRKVSD
TSEAYGLAALDISTGRFSLSEVESSELAAAIARHEPREIVLSEVIHADPGLAKLWRETKA
AVVPLAQGELEPASAERRIREQFGVKTLDGFGNFSRAEIAAAGAALLYLERTQLGTRVPL
SAPSREATGATLAIDAATRANLELTRTLSGERKGSLLDAIDRTVSAGGARLLAEHLAGPL
TDLTEIGRRHDAVAFLAEDGALRAHLRDALHAAPDIARALSRIGLNRAGPRDLAALRAGL
DAAATIAEQLRAEENLPDGLTRLARRLDKADRALADELAQALADDLPLNRRDGNFVRAGY
HAEIDEARLLGQDSRKVIAALQARYAEASGCRTLRIKHNNVLGYYIEVPQAVGEACLKGL
MQDFVHRQTMVDAMRFTSVELGELESKIAGASDRVLALESAVFDALSARVSEGAEAIADI
AEALSGLDVAASHAELAVELAWTRPLIDDSLAFAIEGGRHPVVEAALTKAGEAFIANACD
LSGDEAGRIRLVTGPNMGGKSTFLRQNALIAVLAQMGAFVPAASARLGVVDRLFSRVGAA
DDLARGHSTFMVEMVETAAILNQATRRSLVVLDEIGRGTATFDGLSIAWACLEHLHEKNG
CRALFATHFHELTALSQRLPRLDNATLKVAEDRGDVVFLHEVVPGVAERSYGLQVARLAG
LPPSVVARAGAILKGLETSERERPARRKIDDLPLFASLAAAPPPPPEPVKPEPDDRLGQL
IDRLDPDAMTPREALDALYRLKKERAAG
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggcgcaagcggggctgctagcctcggcttcatgtccagaccccagcgttcccaa
cccctcgaacggcgtgcccaggcggcggatacggtgacttcctcgcccctcgacatcccc
ggcgccacgccgatgatggcgcagtacatcgagatcaaggccgccaatccggactgcctg
ctgttctaccggatgggggacttctacgagctgttcttcgaggatgcggagatcgcctcg
cgcgcgctcggcatcgtcctgaccaagcgcggcaagcacggcggcgccgacatcccgatg
tgcggcgtgcccctggagcgggcggacgactatctgcaccggctgatcgcgctgggccac
cgcgtcgccgtctgccagcagaccgaggacgccgcggaagccaagaagcggggcccgaaa
tcggtggtgcggcgcgaggtgatccgcctcgtcacgccgggcacgctgaccgaggaccgc
ctgctcgacccgacgcgggccaacctgctgctcgccatcggccggcgcaaggtctccgac
acgagcgaggcctacgggctcgccgccctcgacatctccaccggccggttctcgctgagc
gaggtggagagctcggaactcgccgccgcgatcgcccggcatgaaccgcgggagatcgtg
ctctcggaggtcatccacgccgatccaggcctagccaagctgtggcgcgagaccaaggcg
gcggtggtgccgctggcccagggcgaactggagccggcctcggccgagcggcgcatccgc
gagcaattcggcgtcaagaccctcgacgggttcgggaatttcagccgggcggagatcgcc
gcggccggggcggctttgctctatctcgagcgcacccagctcggcacccgcgtgccgctc
tcggcgccgagccgcgaggcgacgggggcgacgctcgccatcgacgcggccacccgcgcc
aacctcgaactcacccgcaccctctcgggcgagcgcaagggcagcctgctcgacgccatc
gaccgcacggtctcggccggcggcgcccggctgctcgccgagcatctggccgggcccctg
acggacctgaccgagatcggacggcggcacgacgccgtcgccttcctggcggaggacggc
gcgctgcgggcgcatctgcgcgacgcgctgcacgccgcccccgacatcgcccgcgcactg
tcgcgcatcggcctgaaccgggccggcccgcgcgacctcgccgccctgcgcgccgggctc
gacgccgccgcgacgatcgctgagcagcttcgcgcggaagaaaatttgccggacgggctg
acccgtctcgcccgccgcctcgacaaggccgaccgggcgctggccgatgaactggctcag
gcgctcgccgacgacctgccgctcaaccgccgcgacggcaatttcgtgcgcgcgggctac
cacgccgagatcgatgaggcccggctgctcggccaggactcgcgaaaggtcatcgccgcg
ctccaggcgcgctatgccgaggccagcggctgccggacgctccggatcaagcacaacaac
gtgctgggctactacatcgaggtgccgcaggcggtgggcgaggcctgcctcaagggcctg
atgcaggacttcgtgcatcgccagaccatggtcgatgcgatgcgcttcaccagcgtcgaa
ctcggcgagctggaatcgaagatcgcgggcgcctccgaccgggtgctggcgctcgaatcc
gcggtgttcgatgccttgagcgcacgggtgagcgagggggcggaggcgatcgccgatatc
gccgaggcgctgtcgggcctcgacgtggccgcgagccacgccgagctcgcggtcgaactc
gcctggacccggccgctcatcgacgacagcctcgccttcgcgatcgaggggggacgccat
cccgtggtggaggcggcgctgaccaaggccggcgaggccttcatcgccaatgcctgcgac
ctgtccggcgacgaggccgggcgcatccgcctcgtcaccggcccgaacatgggcggcaaa
tcgaccttcctgcgccagaacgcgctgatcgccgtgctggcgcagatgggcgccttcgtg
ccggcggcctccgcccggctcggggtggtggaccggctgttctcccgcgtcggcgcggcc
gacgacctcgcgcgcggccactcgaccttcatggtcgagatggtcgagaccgccgcgatc
ctcaatcaggcgacccgccgctccctggtggtgctcgacgagatcggccgcggcaccgcg
accttcgacggcctctccatcgcctgggcctgcctggaacacctgcacgagaagaacggc
tgccgggctttgttcgcgacccacttccacgagctgacggcgctgagccagcgcctgccg
cgcctcgacaacgcgacgctgaaggtggccgaggaccgcggcgacgtggtgttcctgcac
gaggtggtgccgggcgtggccgagcgctcctacggcctccaggtcgcccgcctcgccggc
ctgccgccgagcgtggtggcgcgggccggcgcgattctgaaagggctcgaaacctcggag
cgcgagcgccccgcccgccgcaaaatcgacgacctgccgctcttcgccagcctcgccgcc
gcaccgcccccgccgccggagccggtgaaacccgagccggacgaccggctcggccagttg
atcgaccgcctcgatcccgatgcgatgacgccgcgcgaggccctcgacgcgctctaccgg
ctgaagaaggagcgtgccgcggggtga
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