Methylorubrum extorquens DM4: METDI5474
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Entry
METDI5474 CDS
T00947
Name
(GenBank) conserved hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdi03400
]
METDI5474
Enzymes [BR:
mdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
METDI5474
DNA repair and recombination proteins [BR:
mdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
METDI5474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CAX27082
UniProt:
C7CMT7
LinkDB
All DBs
Position
5422059..5425202
Genome browser
AA seq
1047 aa
AA seq
DB search
MSASAAPRVFTIPPGAPFLPTLADALVSGRLVGAVGGDPFALASVTLYLPTQRAVRALST
VLAQRLGGAALLPRMIPLGEADEAELDLSSNTLLETPEDLLYPSIPALERRLILARLVQK
WAETVDRELLPIDDEVPFLVPSSPADAVALAADLEGLMDALTVEGLPWSEIAAAVEAEHS
RYFRLTLDFLKIAAEHWPDILAARSLADPTARARRLVLAEADRLFRERPGDPVIVAGSTG
SVPATARLIAAVARLPRGAVVLPGLDLHLDAEGWEAIDGAGGKHDEIAHGHPQAILRALT
GPRGFAVERRDVETLGDLSPEAVAREKLLSQALRPAETTDAWAGLDAAERMTLAREGMAG
LAVVEAADEREEALVAALALRETLETPGATAALVTPDRGLALRVSAELARWGIAAEDSAG
LSLARSQAGRFARLVAELAAEVAPARVIALLAHPFVRLGLTRSEVVRAAAALEIGGLRGP
APIPKNSFDGMRAAVALQRNATERVPRAKKRLKPVDWDLAEDILDRLEIALDAFRTDLQP
EIGNLVALAAGHREACERMMGGAEEGDADETDDPSLDTLDGLFDDLESAEQEELPGRFSD
YAAFFTALARDRTVACAQRSAHPRLRILGPLEARLLSVDRIVLGGLDETVWPVRQTTDAF
LSRPMRGDVGLSPPERRIGQAAHDFVQGLGTHDAVVTRAAKREGSPTVPSRFLQRLRAFG
GDAVWADAIARGQRLRGLAARLDRGQEAPPPRLKRPAPKPDPALFPERLSVTEIETLVRD
PYSIYARHILGLEALEPIAVVPGAAERGSLIHKVLGDFSQAHPGALPADAETLLYAIAFD
AFGPLQDQYPELYAEWFPRYERMAVAFLEWEASQRQGLHTIHAERSGKVTIPLGERTFTL
SARADRIEVRADGSYCIVDFKTGTPPSNRTVFAGFSPQLTLEAAMLMHGAFEGLKAAAPP
DLLYIYASGGREPFRPIPVKPPPGDARAVEAVVEEHWQRLRGLIARYMTGEAAYLSRPYP
QYERAYNEYDHLARVLEWSLAGQGEAA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctagcgccgccccccgcgtcttcacgattccccccggcgcgccgttcctgccg
acgctggcggacgccctcgtgtcgggccgcctcgtcggcgcggtcggcggcgatcccttc
gcgctcgcctcggtgacgctctacctgccgacgcagcgcgcggtgcgcgcgctctcgacc
gtgctggcgcaacgcctcggcggagcggccctgctgccgcggatgatcccgctgggcgag
gccgacgaggcggagctcgacctctcgtccaacacgctgctggagacgccggaagacctg
ctctacccctcgattcccgcgctggagcgccggctgatcctggcccggctcgtccagaaa
tgggcggagacggtggaccgtgaactcctgcccatcgacgacgaggtgcccttcctcgtc
ccgtcctcccctgccgacgcggtggcgctcgccgccgacctcgaagggctgatggacgcg
ctcaccgtcgagggcctgccctggagcgagatcgccgcggcggtggaggccgagcattcg
cgctatttccgcctcaccctcgacttcctgaagatcgctgccgagcactggcccgacatc
ctcgccgcccgttcgctcgccgaccccaccgcccgcgcccgccgcctcgtgttggccgag
gccgaccggctgttccgcgagcggccgggcgatccggtgatcgtggccggctccaccggc
tcggtgccggccaccgcccggctgatcgcggcggtggcccgcctgccccgcggcgcagtg
gtgctgccggggctcgacctgcacctcgacgcggagggctgggaggcgatcgacggcgcc
ggcggcaagcacgacgagatcgcccacggccatccgcaggcgatccttcgggcgctgacc
ggaccgaggggttttgccgtcgagcgcagggatgtcgagacgctcggagatctctcgccc
gaggcggtggcgcgggaaaagctgttgtcgcaggcgctgcgcccggccgagactaccgat
gcctgggccgggctcgacgcggccgagcggatgaccctcgcacgggagggcatggcgggc
ctcgccgtggtcgaggcggcggacgagcgcgaggaggcgctggtcgctgcgctcgccctg
cgcgagacgctggagacgcccggcgccacggcggccctcgtcacgccggaccgcgggctg
gccctacgcgtctcggccgaactcgcccgctggggcattgcggccgaggattcggcgggc
ttgagcctggcgcgctcgcaggccgggcgtttcgcccggctggtcgccgaactcgccgcc
gaggtggcgccggcccgcgtcatcgcgctcctcgcccaccccttcgtccggctcgggctc
acccgcagcgaggtcgtgcgcgcggccgctgccctcgagatcggcggcctgcgcggcccc
gccccgatcccgaagaacagcttcgacgggatgcgggcggcggtggcgctgcaacgcaac
gccaccgagcgggtgccgcgcgccaagaagcggctgaagccggtcgattgggatctcgcc
gaagacatcctggaccggctggagatcgccctcgatgcgttccgcaccgacctgcagccc
gagatcggcaacctcgtggcgctcgccgccgggcaccgcgaggcctgcgagcggatgatg
ggcggggccgaagagggtgacgcggacgagaccgacgatccctccctcgacacgctcgac
ggcctgttcgacgacctcgaatccgctgagcaggaagagctgccgggccggttctccgac
tacgccgccttcttcaccgcgcttgcccgcgaccgcactgtcgcctgcgcgcagcggagc
gcgcatccgcgcctgcgcatcctcgggccgctcgaagcgcgcctgctctccgtcgatcgc
atcgtgctgggcgggctcgacgagacggtctggccggtgcgccagaccaccgacgccttc
ctcagccggccgatgcgcggagatgtgggcctgagcccgcccgagcggcggatcggacag
gcggcccacgacttcgtgcaggggctcggcacccatgacgccgtggtcacccgcgcggcc
aagcgcgagggctcgccgacggtgccgtcgcgcttcctccagcgcctgcgtgccttcggc
ggtgatgcggtctgggccgacgccatcgcccgcggccagcgcctgcgcgggctcgccgcg
cggctcgatcgtggccaggaggcgccgcccccgcggctcaagcgcccggctccgaagcct
gacccggctctgttcccggagcgtctcagcgtcaccgagatcgagacgctggtgcgcgat
ccctactcgatctacgcccggcacatcctgggcttggaggcgctggagccgatcgccgtg
gtgccgggcgcggccgagcgcggcagcctgatccacaaggtcctcggcgatttctcgcaa
gctcatcccggcgcgttgccggcggatgcggagaccctgctctacgcgatcgctttcgac
gccttcggcccgcttcaggaccagtacccggaactctacgccgagtggtttccccgctac
gagcgcatggcggtcgccttcctcgaatgggaggcgagccagcgccagggcttgcacacg
atccacgccgagcgctcgggcaaggtgacgattcctctgggcgagcgaaccttcacgctc
tcggcccgtgccgaccggatcgaggtccgcgccgacggcagctactgcatcgtcgatttc
aagaccggcacgccgccgagcaaccgcaccgtctttgccggtttctcgccccagctcacc
ctggaggcggcgatgctgatgcatggcgccttcgaggggctgaaggccgccgccccgccg
gacctcctctacatctacgcctcgggtgggcgcgagccgttccggccgatcccggtcaag
ccgccgcccggcgatgcgcgggcggtggaggccgtcgtcgaggagcattggcagcgcctg
cgcggattgatcgcccgctacatgaccggcgaagctgcctacctgtcgcgcccctatccg
caatacgagcgtgcctacaacgagtacgatcacctcgcccgcgtgctcgaatggtcgctg
gccgggcaaggagaagccgcgtga
DBGET
integrated database retrieval system
