Methylorubrum extorquens DM4: METDI5617
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Entry
METDI5617 CDS
T00947
Symbol
gyrA
Name
(GenBank) DNA gyrase, subunit A (type II topoisomerase)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdi03032
]
METDI5617 (gyrA)
03400 DNA repair and recombination proteins [BR:
mdi03400
]
METDI5617 (gyrA)
Enzymes [BR:
mdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
METDI5617 (gyrA)
DNA replication proteins [BR:
mdi03032
]
Prokaryotic type
DNA Topoisomerases
METDI5617 (gyrA)
DNA repair and recombination proteins [BR:
mdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
METDI5617 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CAX27222
UniProt:
C7C7U6
LinkDB
All DBs
Position
5585851..5588586
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AA seq
911 aa
AA seq
DB search
MADDNDQPGAGTPPPATDIKPVSITDEMRRSYLDYAMSVIVSRALPDARDGLKPVHRRIL
FAAHESGHLPERRYVKSARIVGDVIGKYHPHGDQSIYDALVRMAQDFSMRLMLIDGQGNF
GSVDGDPAAAMRYTESRLAKPASALLSDIDKNTVDFQANYDGEHEEPTVLPARFPNLLVN
GAGGIAVGMATNIPPHNLGELIDACIALIDDPSLTIEALNEIVPGPDFPTGGLILGRAGT
RQAYATGRGSIIMRAKSHIEELRKEREALIFTEIPYQVNKATLVEKIAELVKEKRVEGIS
DLRDESDRDGMRIVVEIKRDAMAEVVLNQLYRYTPLQSSFGCNMVALNGGRPELMNLKDL
LLAFNDFREEVVSRRTKFLLNKARERAHVLCGLAIAVANIDEVIRLIRTSPDPNTAREAL
MARDWPAHDIAPLIALVDDPRYRVAEDGTYRLSEIQARAILDLRLQRLTALGRDEVGDEL
KKLADEIADYLDILRSRVRIQAIVKTELAEVRALFATPRKTEIIDSDFSVEDEDLIARED
MVVTVSHAGYVKRVPLSTYRAQRRGGKGRSGMATRDEDFVTRLFVASTHTPVLFFSDQGQ
AYKEKVWRLPMAAPNARGKALVNILHLQNEGERISTIMPLPEDETSWDTLDVMFATASGN
VRRNKLSDFTTVNRNGKIAMKLDPGDHIVHVEICRPEQNVLLTTALGQCIRFPVEDVRVF
KGRDSTGVRGINLAQDDKVISMAILNAFDASPEERAGYLKMRRAVIGDAGEAEAEPAEAE
EASEASAISLERYNEMGAAEQFVLTLSDRGFGKRSSSYEYRTSGRGGKGITAMRVNARNG
NLVASFPVEASDQIMLVTNAGQLIRVPVDDIRIVGRASQGVTVFNTDKAERVVSVEHIEG
EDENENGEEAV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
ttggcagacgacaacgaccaacccggcgccggcacgcccccgcccgcgaccgacatcaag
cccgtctccatcaccgacgagatgcgccggtcctacctcgattacgcgatgagcgtgatc
gtgagccgcgcgctgcccgatgcgcgcgacggcctcaagcccgtgcaccggcgcatcctg
ttcgcggcgcacgagagcgggcacctgcccgagcgccgctacgtcaagtcggcccgcatc
gtcggcgacgtgatcggtaagtaccatccgcacggcgaccaatcgatctacgacgccttg
gtccgcatggcccaagacttctcgatgcgcctgatgctcatcgacgggcagggcaatttc
ggctcggttgacggcgatccggccgcggccatgcgctacaccgaatcgcgtctggccaag
cccgccagcgcgctcctctcggacatcgacaagaacaccgtcgatttccaggcgaactat
gacggggagcacgaggagccgaccgtcctgccggcccgcttcccgaacctgctggtcaac
ggcgcgggcggcatcgcggtgggcatggccaccaacatcccgccgcacaatctcggcgag
ctgatcgacgcctgcatcgccctcatcgatgatccgagcctgaccatcgaggcgctcaac
gagatcgtgcccggtcccgacttcccgaccggtggcctgatcctcggccgcgccggcacc
cggcaggcctacgccacgggccgcggctcgatcatcatgcgggcgaagtcccatatcgag
gaactgcgcaaggagcgcgaggcgctgatcttcaccgagatcccgtatcaggtgaacaag
gcgacgctggtcgagaagatcgccgagctggtcaaggagaagcgcgtcgagggcatctcg
gacctgcgcgacgaatccgaccgcgacggcatgcgcatcgtcgtcgagatcaagcgcgac
gccatggccgaggtcgtgctgaaccagctctaccgctacacgccgctgcaatcctcgttc
ggctgcaacatggtggcgctgaacggcggccgccccgagctgatgaacctgaaggacctg
ctgctggccttcaacgacttccgcgaggaggtcgtctcccggcgcaccaagttcctgctc
aacaaggcgcgcgagcgggcccacgtcttgtgcggtctggccatcgcggtcgccaatatc
gacgaggtgatccgcctgatccgcacctcgccggacccgaacaccgcccgcgaggcgttg
atggcccgcgactggccggcccacgacatcgccccgctgatcgcgctggtggacgatccg
cgctaccgcgtggccgaggacggcacctaccggctctcggagatccaggcccgcgcgatc
ctcgacctgcgcctgcagcgcctcaccgctctcggccgtgacgaggtcggcgacgagttg
aagaagctcgccgacgagatcgccgactatctcgacatcctgcgctcgcgcgtccgtatc
caggcgatcgtgaagacggaactggccgaggtgcgcgccctcttcgccaccccgcgcaag
accgagatcatcgattccgatttcagcgtcgaggacgaggatctgatcgcccgcgaggac
atggtcgtgaccgtgtcccatgccggctacgtcaagcgcgtgccgctctcgacctaccgg
gcccaacgccgcggcggcaagggccgctccggcatggcgacccgcgacgaggatttcgtc
acccggctgttcgtggccagcacccacacgccggtgctgttcttctccgaccagggccag
gcctacaaggagaaggtctggcgcctgccgatggccgcgccgaacgcccggggcaaggcg
ctcgtcaacatcctgcaccttcagaacgagggtgagcgcatctccacgatcatgccgttg
cccgaggacgagacgtcctgggacacgctcgacgtgatgttcgccaccgcctccggcaat
gtccgccgcaacaagctgtcggacttcaccacggtgaaccgcaacggcaagatcgcgatg
aagctcgatccgggcgaccacatcgtccatgtcgagatctgccggcccgagcagaacgtg
ctgctcaccaccgcgctcggccagtgcatccgcttccccgtggaggatgtgcgcgtcttc
aagggccgcgactcgaccggcgtgcgcgggatcaacctcgcccaggacgacaaagtcatc
tcgatggcgatcctcaatgccttcgacgcatcccccgaggagcgggccggctatctcaag
atgcgccgggcggtgatcggcgacgcgggcgaggcggaggccgagccggccgaggccgag
gaggcttcggaggcctcggcgatctcgctggagcgctacaacgagatgggggccgcggag
cagttcgtgctgaccctgtccgatcgcggcttcggcaagcgctcgtcgtcttacgagtac
cggacctcgggccgcggcggcaaaggcatcacggcgatgcgggtcaacgcccgcaacggc
aacctcgtcgcctccttccccgtcgaggcgtcggaccagatcatgctggtcaccaatgcc
ggccagctcatccgcgtgccggtggacgacatccgcatcgtcggccgcgcctcgcagggc
gtgacggtgttcaacaccgacaaggccgagcgtgtcgtctcggtggagcacatcgagggc
gaggacgagaacgagaacggcgaagaggccgtctga
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