Methylorubrum extorquens DM4: p1METDI0033
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Entry
p1METDI0033 CDS
T00947
Symbol
rffG
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00521
Streptomycin biosynthesis
mdi00523
Polyketide sugar unit biosynthesis
mdi00525
Acarbose and validamycin biosynthesis
mdi00541
Biosynthesis of various nucleotide sugars
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
mdi01250
Biosynthesis of nucleotide sugars
Module
mdi_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
p1METDI0033 (rffG)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
p1METDI0033 (rffG)
01055 Biosynthesis of vancomycin group antibiotics
p1METDI0033 (rffG)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
p1METDI0033 (rffG)
00525 Acarbose and validamycin biosynthesis
p1METDI0033 (rffG)
Enzymes [BR:
mdi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
p1METDI0033 (rffG)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
KR
Motif
Other DBs
NCBI-ProteinID:
CAX17025
UniProt:
C7CMZ6
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All DBs
Position
p1METDI:37078..38136
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AA seq
352 aa
AA seq
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MRILVTGGCGFIGSALVLHLVQDLGHEVLTLDALTYAANPISLDPLKGDARHRLEQADIC
DPARVHALYAAFKPDAVMHLAAESHVDRSITDPGAFVRTNVIGTQVMLDGARTHWESLSG
EAKQNFRFLHVSTDEVYGSLPPDAFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV
LVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHVEDHARGLVAVLKR
GRLGETYLLGGRSVRNNLAVVKALCAAFDRLRPESGPHERLITFVADRPGHDRRYAIDPA
KAEAEVGWRPTKVFEQALEETVRWYLDNEAWWRPIREGRYSGERLGLAGKSA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctggtaacgggcggctgcggcttcattggctccgccctcgtgctgcacctc
gtgcaggatctcggccacgaggtgctgaccctcgatgccctgacctacgccgccaacccg
atctcgctcgatccgctgaagggtgatgcccggcaccgcctggaacaagccgacatctgc
gatccggcccgcgtccacgccctctacgccgcgttcaagcccgatgcggtgatgcatctg
gccgccgagagccatgtcgaccgctcgatcaccgatccgggtgcgttcgtgcgcaccaac
gtgatcggcacccaggtgatgctcgacggcgcccgcacccactgggagagcctgtcgggc
gaggccaagcaaaacttccgcttcctccacgtctcgaccgacgaggtctacggctcgctg
ccgccggacgcgttcttcaccgaggagagccgctacgacccgcgctcgccctactcggcc
tcgaaagcggcttccgaccatctcgcccgcgcctggcacgagacctacggcctgccggtg
ctcgtgaccaactgctcgaacaattacggcccgcgccatttccccgaaaaactgatcccg
ctgatgatcctggcggcgctggagggcaaaccgctgccggtctacggcgacggcctgaac
gagcgcgactggatccatgtcgaggaccatgcccgcggcctcgtcgcggtgctgaaacgg
ggccggctcggcgagacctatctgctaggcgggcgctcggtgcggaacaacctcgccgtg
gtgaaggcgctctgcgccgccttcgaccggctccggcccgagagcggcccgcacgagcga
ctgatcacttttgtggccgaccggcccggccatgaccggcgctacgccatcgacccggca
aaggccgaggccgaggtcggctggcggccgaccaaggtgttcgagcaggcgctggaagag
accgtgcgctggtacctcgacaacgaggcgtggtggcgcccgatccgcgagggccgctat
tccggcgagcgcctcggcctcgcgggcaagagcgcgtga
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