Mucilaginibacter daejeonensis: LLH06_11075
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Entry
LLH06_11075 CDS
T07909
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mdj
Mucilaginibacter daejeonensis
Brite
KEGG Orthology (KO) [BR:
mdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdj03032
]
LLH06_11075 (topA)
03400 DNA repair and recombination proteins [BR:
mdj03400
]
LLH06_11075 (topA)
Enzymes [BR:
mdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LLH06_11075 (topA)
DNA replication proteins [BR:
mdj03032
]
Prokaryotic type
DNA Topoisomerases
LLH06_11075 (topA)
DNA repair and recombination proteins [BR:
mdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LLH06_11075 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Poly_export
DUF2255
Motif
Other DBs
NCBI-ProteinID:
UEG51514
LinkDB
All DBs
Position
2617595..2619931
Genome browser
AA seq
778 aa
AA seq
DB search
MAKNLLIVESPAKAKTIEGYLGKDFTVKSSYGHIRDLVKSEDAIDIPNNFKQRYEVPADK
KQVVSELKKLAKEAEMVWLASDEDREGEAISWHLFETLGLKNDKTKRIVFHEITKPAILK
AIDNPRTIDYNLVNAQQARRVLDRLVGFELSPVLWKKVKPSLSAGRVQSVAVRLIVERER
EINKFTAEAAFRVVAIFGKGRDAFKAELPERFSKEEDAQKFLQDCVDAAFTVKSLDTRPT
KRSPAAPFTTSTLQQEASRKLGFSVSRTMSVAQRLYESGKITYMRTDSVNLSDMALNAAQ
QQITSAYGEKYHQLRKYKTKSASAQEAHEAIRPTYFNEHTIDGESAEKRLYELIWKRAIA
SQMSEAQFEKTTAKIDISTRKEDLVANGEVMKFDGFLKVYLESNDDEEDNTQDGDNAILP
PLTQGQVLSLQEMTATERYSRPPARYTEASLVKKLEELGIGRPSTYAPTISTVQNRGYVV
KEDREGKQRNFRVLTLKDKAIRQEQKTENTGAERGKLFPTDIGAVVNDFLVQHFNGIVDF
HFTAKVEKQFDEIAQGLTEWTQMLNSFYHPFHEGVESTIQTAEKARGERELGVHPESGKK
ISVRIGRFGPFVQIGDTDTESEEKPQYASLRTGQMIETITLEEALELFKLPKKVGIFEEK
DMTVAIGKFGPYIRHNSAFYSLPKGVDPMSVTEQQAIEIIEEKRKKDAEKLIKTFDENPD
VKILNGRWGPYIEFGKLNVKIPKGKEPLQLTYEECKALADEAEKAPKKPAGKKFAKKK
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaatctactcatcgtcgaatcacccgctaaggccaagaccatcgaaggttac
ctcggcaaagactttactgtaaagtcgagctacggtcacatccgtgatcttgtcaaatca
gaggatgctatcgacattcctaacaacttcaaacaaagatacgaggtacccgccgataag
aagcaggtggttagcgagttaaagaaattagctaaggaggccgaaatggtttggcttgca
tccgatgaggaccgcgagggagaggccatatcatggcacttgttcgagactttgggtttg
aagaatgacaagaccaagcgtatcgtatttcacgagatcactaagccggctatattaaag
gcgatcgacaacccgcgaacgatcgactataatctggtgaacgcccaacaggcgcgccgc
gtactggaccgattggtcggtttcgaattatcacctgttctttggaaaaaagtaaagcca
tcattatcggcgggtcgtgtacaatcggtagcggtaaggctgatcgttgagcgcgagcgt
gagatcaataaatttactgcggaagccgcattcagagtggtggccatttttggcaaagga
agagatgcctttaaggctgaactgccggaacgcttcagcaaagaagaagacgctcagaaa
tttttacaagattgtgtagacgctgcctttacggtcaaatcgttagacacgcgccctact
aaacgttctcctgctgcgccattcactacatcaaccctgcagcaagaagccagtcgtaag
ctgggtttttcggtttcgcgtaccatgtcggtagcgcagcgcttgtacgagtcgggtaag
atcacttacatgcgtaccgatagtgtgaacctgtctgacatggccttgaacgccgctcag
cagcagatcacatcggcctatggcgaaaagtatcatcagcttagaaaatacaagaccaag
tcggccagtgcgcaggaagcacacgaggcgatccgccctacttactttaacgaacatacc
attgacggtgagagtgcagagaaacgcctttacgaactgatatggaagcgtgcgatcgcc
tcgcaaatgagcgaagcgcagttcgaaaaaaccaccgccaagatcgacatctccactcgt
aaagaggacctggtcgccaacggtgaagtaatgaaattcgatggcttcctaaaagtgtac
ttagaatcgaacgacgacgaggaagataacacccaggatggcgacaacgccatacttcca
ccgttaacacaaggtcaagtgttgtccttacaggaaatgaccgctacggaacgttattct
cgccctcctgcaagatatacggaagcaagcctggtgaagaagttagaagaactcggcata
ggtcgtccttctacctacgcacctaccatctcaacggtgcagaaccgtggttacgtggta
aaagaggaccgcgaaggaaagcaacgtaatttccgcgtgctgaccttaaaggacaaagcc
atcaggcaggagcaaaagaccgagaacaccggcgccgagcgtggcaagctgttcccgacc
gatataggtgcggtggtgaacgactttttagttcaacattttaacggcatcgttgatttc
cactttaccgccaaggtagaaaagcaatttgacgagatagcccagggcctcaccgaatgg
acccaaatgttgaatagcttttaccacccgttccatgaaggtgttgagagtactattcaa
accgctgaaaaagcccgcggcgaacgcgagctgggcgtgcatccggagagtggtaaaaag
atatcggtacgtataggccgtttcggtccgttcgtgcagatcggtgatacggataccgag
tcggaagagaagcctcagtatgccagtttgcgtaccggtcaaatgatcgagaccattacc
ctcgaagaagcactggaattgttcaagctgcctaaaaaggtaggtatttttgaagagaaa
gatatgaccgtggccattggtaaattcggcccgtacattcgccataacagcgctttttac
tcgttacccaaaggtgtcgaccccatgagcgtgaccgaacaacaggccatcgagatcatc
gaggaaaagagaaagaaggatgccgaaaagctgatcaagacctttgatgagaacccggac
gtgaagatcttgaacggacgctgggggccatacattgaattcggtaagttgaacgttaag
ataccaaaaggtaaagagccgctccaactcacttatgaggagtgcaaggccttggcagat
gaggccgaaaaagcaccaaagaaacccgcgggtaaaaaatttgctaaaaagaaataa
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