Mucilaginibacter daejeonensis: LLH06_12570
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Entry
LLH06_12570 CDS
T07909
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mdj
Mucilaginibacter daejeonensis
Pathway
mdj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LLH06_12570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdj03400
]
LLH06_12570
Enzymes [BR:
mdj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LLH06_12570
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LLH06_12570
DNA repair and recombination proteins [BR:
mdj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LLH06_12570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Ribosomal_S13
NFACT_N
T2SSE
Motif
Other DBs
NCBI-ProteinID:
UEG51797
LinkDB
All DBs
Position
complement(2965012..2965794)
Genome browser
AA seq
260 aa
AA seq
DB search
MPELPDLEVFSRNLTKVLKNKELVKVSVSVSKKLNISSTELANALEGSKLNRVVRTGKQL
RFDLNNGHSLGLHLMLHGELHWFEKQNDHKHTILELLFEGDKGLAVTDFQKAATPTLDPD
EAEVPDALDDAVDVAFWQKTLQKSKKQVKVILMDQKVIRGIGNAYADEILYDAGISPFAA
ANTIPDRYIKELDASIKNVLNNAIKQILDKDPDIITGEVRDFLCVHRPKQKTTPKGETIL
VGESGGRKTYYTEAQKTFDQ
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactacccgacctcgaagtattcagccgtaacctcaccaaggttttaaagaac
aaggaattggtgaaagtgagcgtatcagtttccaaaaagctgaacataagttcaacggaa
ttggccaacgcgctggaaggaagtaagctaaaccgtgtggtgcgtaccggtaagcaattg
cggttcgaccttaacaatggacactccttgggtctccacctgatgttgcatggtgagctg
cactggttcgaaaagcagaacgaccacaagcacaccattttggaactactcttcgagggt
gacaaaggattggccgttaccgactttcaaaaagcagccacgcctacgctcgaccctgat
gaagctgaagtgcctgacgccttagatgatgcggtcgacgttgccttttggcaaaagacc
cttcaaaaaagtaagaagcaggtcaaggtgatcttgatggatcaaaaagtgatcaggggt
atcggcaatgcctatgctgacgagatcttatacgatgctggtatctctccattcgcggcg
gcgaatacgataccagatcgatacatcaaagaacttgatgcctccataaaaaatgtccta
aataacgcgatcaagcagatccttgataaagaccccgatatcattaccggcgaggtaagg
gactttttgtgtgtgcaccgacctaagcaaaagaccactccaaagggtgaaactatactt
gtgggtgaatcaggagggcgaaagacctactataccgaagctcaaaaaacctttgatcaa
tag
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