Mucilaginibacter daejeonensis: LLH06_12610
Help
Entry
LLH06_12610 CDS
T07909
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mdj
Mucilaginibacter daejeonensis
Pathway
mdj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLH06_12610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdj03019
]
LLH06_12610
03400 DNA repair and recombination proteins [BR:
mdj03400
]
LLH06_12610
Enzymes [BR:
mdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LLH06_12610
Messenger RNA biogenesis [BR:
mdj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LLH06_12610
DNA repair and recombination proteins [BR:
mdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LLH06_12610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
HTH_24
GntR
Motif
Other DBs
NCBI-ProteinID:
UEG51805
LinkDB
All DBs
Position
complement(2973880..2975772)
Genome browser
AA seq
630 aa
AA seq
DB search
MTIEQILKYYWQHNAFRPLQKDIIEAVMQGQDTLALLPTGGGKSVCYQVPAMAMDGICIV
VSPLIALMKDQVDNLQSKGIEAVAIVSGMGKREVDIALDNCIYGPVKFLYLSPERLLSDL
VRERIKYMKVNLIAVDEAHCISQWGYDFRPPYLHVADLRQLHPKVPVLALTATATANVRD
DIQDKLQFRARHVIQQSFERKNLSYRVQHEENKLRRMLEVARSVNGSGIVYVRNRKETTE
LAKFFNDHGIAADHYHAGLSGDRRSAKQEQWKSNHIRIIVATNAFGMGIDKPDVRFVIHK
DLPESLEAYYQEAGRAGRDGQKAYAILLYNQSDRQKQEYRFEVSFPSVDEIKQVYHYLAN
YYQLAYGAGEGLSFDLDLADLCSRFKLDVLKTLNALKFLEHGEYLNFNESVFLPSRFRFE
VEHEELYNFQIQNPAWDPFIKTMLRSYGGAFEHYTRIREFDLARRTNLSVQQVTEALQQL
NDLGVLSYLPQTDKPQVTYLKPRHTAANLWIDRQYLDTRRLVYQKKMEAILAYSETDRCR
SQQLLAYFNEPDAEKCGVCDVCLREKRRNDAPLLHDRIRDEILQLLSTSPLDLEQLISGI
AHGKQPDRLTVLRQLLDAGRIKTTGNKYYL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgagcagatcttaaaatattactggcagcataacgcgttcaggcctttgcaa
aaggacatcatcgaggccgtgatgcagggacaggatacattggcgctgctgcctacgggc
ggtggtaagtcggtgtgctaccaggtgcctgctatggccatggatgggatctgcatcgtg
gtatcgccgctgatcgcgctcatgaaggatcaggtcgataacctgcaaagcaagggcatc
gaggcggtggccatcgtgtcgggaatgggaaagcgggaggtggacatcgcgctggataat
tgtatttacgggccggtcaagttcctgtacctatcacccgagcggttgttgagcgatctg
gtgcgcgagcgcatcaagtacatgaaggtgaacctgatcgcggtggacgaagcacattgt
atctctcagtggggatatgattttcgtccgccgtacctgcacgtggccgatctgcgtcag
ctgcaccccaaagtgccggtactggcccttacggccaccgccacggccaacgtgcgcgat
gatattcaagataagctgcagttcagggcccggcatgtgatccagcaaagtttcgagcgc
aagaatttgagctaccgtgtgcagcacgaggagaataaactccgccgcatgctggaggtt
gcccgcagtgtgaatggaagcggtatcgtgtacgtgcgcaaccgcaaggagaccaccgag
ctggccaagttctttaacgaccatggcattgcggccgatcattaccacgccggcctgagc
ggcgatcggcgcagcgccaagcaagagcagtggaagagtaatcacattcgtatcattgtg
gctaccaatgcgttcggcatgggtatcgataaacctgatgtgaggttcgttatccataaa
gacctgcccgagagtttggaggcctactaccaggaggcgggccgcgccgggcgcgacggg
caaaaggcctacgccattttactctacaaccaaagcgaccggcaaaagcaggagtaccgt
ttcgaggtgagcttcccatcggtggatgagatcaagcaggtatatcattacctggccaat
tactaccagttggcctatggggcgggcgagggcctcagtttcgaccttgacctggccgac
ctttgcagccgcttcaagctcgatgtactgaaaacgctcaatgccctcaagttcctggag
cacggcgaatatttgaactttaacgagagtgtgttcctgccttcaagattcaggttcgag
gtggagcatgaggaactatacaatttccagatacagaacccagcatgggaccccttcatc
aagaccatgctgcgctcatacggcggtgcgttcgagcactatacccgcatccgcgagttc
gacctggccaggcgtaccaacctcagcgtacaacaggtgaccgaagccttacagcaattg
aatgatctgggtgtgctgagctacttaccgcagaccgataagccacaagtgacctacctc
aagccacggcacacggcggccaacctttggatcgataggcagtacctggacacgcggcgt
ttggtgtatcaaaaaaagatggaggccatactggcttacagcgagaccgatcgctgccgc
agccagcaattgctggcctactttaacgagcccgatgccgaaaagtgcggcgtttgcgat
gtgtgcttacgcgaaaaaaggcgcaatgacgcgcctttattgcatgaccggatccgcgat
gagatactgcagttactcagtacctcaccgttggatctggaacaactgatcagtggcatt
gctcatggcaaacaacccgaccggcttactgtattgaggcagttattggatgccgggcgg
atcaagaccaccggtaataaatattatctgtaa
DBGET
integrated database retrieval system
