Mucilaginibacter daejeonensis: LLH06_13645
Help
Entry
LLH06_13645 CDS
T07909
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mdj
Mucilaginibacter daejeonensis
Pathway
mdj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLH06_13645 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdj03019
]
LLH06_13645 (pnp)
03016 Transfer RNA biogenesis [BR:
mdj03016
]
LLH06_13645 (pnp)
Enzymes [BR:
mdj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LLH06_13645 (pnp)
Messenger RNA biogenesis [BR:
mdj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LLH06_13645 (pnp)
Transfer RNA biogenesis [BR:
mdj03016
]
Prokaryotic type
tRNA degradation factors
LLH06_13645 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
UEG52006
LinkDB
All DBs
Position
complement(3197482..3199623)
Genome browser
AA seq
713 aa
AA seq
DB search
MSYNAIKKVIDLGDGRTIEIETGKLAKQADGSVVVKMGDTMLLATVVSSKEAKEGVDFLP
LSVDYQEKYAATGRIPGGFLRREARLSDYEVLISRLVDRALRPLFPEDYHADTQVMISLI
SADKDIMPDALAGLAASAALSVSDIPFNGPISEVRVAKIDGQLVINPKLSQLANATLEFI
VAGSENDINMVEGESKEIQEAELVEAIKFAHDAIKLQCAAQRELTVEVGKTEKRTYNHEH
SNEELKKAIYAATYDQVYAIASSASAKDERAAKFKEVRDNYIVTLGEIDDITKSLAKKYY
HDVEYDAIRNLVLDEGKRLDGRTTTQIRPIWSEINYLPAAHGSAVFTRGETQSLTSVTLG
GKDDEQMIDGAFINGYNKFLLHYNFPGFSTGEVRPNRGAGRREIGHGNLAMRSLKQVLPP
DDENPYTIRVVSDILESNGSSSMATVCAGTLALMDAGVKIKEPVSGIAMGLITNEEGTKY
AILSDILGDEDHLGDMDFKVTGTKNGIVACQMDLKINGLSYEVLSKALDQAKEGRLHILG
EMAKTIAAPREDYKPFAPRIVTLKIDKEFIGAVIGPGGKIIQEMQRETGANINIEEIDNV
GVVQVFGDNKESIDAAVSRIRAIASKPEVGEIYEGKVRSIMPFGAFIEIMPGKDGLLHIS
EIDHRRLEAMDGVFEIGEIVRVKLLDIDKQGKLKLSRKALIPKPERPAAPKSE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagttacaatgcaataaaaaaagtgatcgatcttggagatggccgcaccatcgagatc
gagaccggcaaactggccaaacaggccgatggttcggtagtggtaaaaatgggcgacacc
atgttactggctactgtggtatcatcgaaagaggctaaagagggtgttgactttttgccc
ttatcagtagattatcaagaaaaatacgcagctacaggtcgtatccctggtggcttttta
cgccgtgaggcccgtttgtcagactacgaggtattgatctcgcgtttggtcgatcgtgct
ttgcgtccgttgttccctgaagattatcatgccgatacacaagtgatgatctcattgata
tcggccgataaagatatcatgcctgatgcactggccggtttggccgcttcggcagcttta
tcagtatctgatatcccttttaacggcccgatctcagaagttcgcgtggccaagatcgat
ggtcagttagtgatcaaccctaaactgagccagttagctaacgctaccttagagttcatc
gtggccggttcagagaacgatatcaacatggtggaaggtgaatcgaaagagatccaggaa
gctgagttggtagaggcgatcaaatttgctcacgacgccatcaaacttcagtgtgctgct
cagcgtgagctgacggttgaagtaggtaagaccgaaaaacgtacttacaaccatgagcac
agcaacgaggagcttaaaaaagctatatatgctgctacttatgatcaggtatatgctatc
gcttcttctgcatcagcgaaggacgagcgtgctgctaaattcaaagaggtacgtgataat
tacatcgttaccttgggcgagatcgacgacatcaccaagtcgcttgctaaaaaatactac
catgatgtagagtacgatgcgatccgtaacctcgtgttagacgaaggtaaacgtttagat
ggccgtaccactacccagatccgcccgatctggagcgagataaactacttgccggccgct
cacggttcagcagtatttacccgtggcgagacccaatcactcaccagcgttaccttaggt
ggtaaagatgatgagcaaatgatcgatggcgctttcatcaacggttacaacaagttcctg
ttgcactacaatttcccaggtttctctaccggtgaggttcgccctaaccgtggtgccggc
cgtcgcgagatcggtcacggtaacctggccatgcgttcattgaaacaagtattgccacca
gatgatgagaacccttacactatccgtgtagtatctgacattctggagtctaacggttca
tcatcaatggctacggtttgcgccggtacattggctttgatggatgccggtgtgaagatc
aaagagccagtatcaggtatcgctatgggtctgatcactaatgaagagggtactaaatac
gctatcctttctgacattttgggcgatgaggatcacctgggcgatatggactttaaagtt
accggtaccaaaaatggtatcgtagcttgccagatggaccttaagatcaatggcttatca
tacgaagtattgagcaaagcacttgatcaggcaaaagaaggccgtttgcacatccttggc
gaaatggctaagaccattgctgctcctcgtgaagattacaaaccattcgctccacgtatc
gtgaccctgaagatcgataaagagttcatcggtgcggtgatcggcccaggtggtaagatc
attcaggaaatgcaacgtgagaccggtgccaacatcaacatcgaagagatcgacaacgta
ggtgtggtacaggtatttggcgacaacaaagaatctatcgacgccgctgttagccgtatc
cgcgccatcgcttcaaaacctgaagtaggcgagatctacgaaggcaaagtacgctcgatc
atgccttttggcgcctttatcgagatcatgccaggtaaggatggcttgctgcacatctct
gagatcgaccaccgccgcttagaggctatggatggcgttttcgagatcggtgagatcgtt
cgtgtgaagctgttagatattgacaagcaaggtaaattgaagctttcaagaaaagctttg
atcccaaaaccggaaagaccagccgctccaaagagcgaatag
DBGET
integrated database retrieval system
