Mucilaginibacter daejeonensis: LLH06_15325
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Entry
LLH06_15325 CDS
T07909
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mdj
Mucilaginibacter daejeonensis
Pathway
mdj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLH06_15325 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdj03021
]
LLH06_15325 (rho)
03019 Messenger RNA biogenesis [BR:
mdj03019
]
LLH06_15325 (rho)
Transcription machinery [BR:
mdj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LLH06_15325 (rho)
Messenger RNA biogenesis [BR:
mdj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LLH06_15325 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
NACHT
OB_RNB
AAA
Mor
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
UEG52327
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All DBs
Position
3586078..3587790
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AA seq
570 aa
AA seq
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MPDTLELNDKLVSELRQMAKELGIAEADELRKAQLITRIVEQEKMIDAARAQRSTLDSNY
GGAEAATAETPAEAPAAEDKPRKRTRTVKGKTAAPAPAPTAEEVGADLFAAPEPVVQAET
AQAGTPNDVEAVEALSEQAAPIAPAALTENTTPAAPVARPQKFERRQNDRDNNNNNNNQP
KQNREKNDQNAKKEEINLDFDNVIVNEGVLEIMPDGYGFLRSSDYNYLTSPDDIYVSQSQ
IKLFGLKTGDTVRGSIRPPKEGEKYFPLVRVEAINGRIPAEVRDRVPFDHLTPLFPSERL
NLFTDAGNYSTRIMDLFSPIGKGQRGLIVAQPKTGKTMLLKDVANAIAKNHPEVYLIILL
IDERPEEVTDMARSVRAEVVSSTFDEPAERHVKIANIVLEKAKRMVECGHDVVILLDSIT
RLARAYNTVAPASGKILSGGVDANALHKPKRFFGAARNIEDGGSLTIIATALTETGSKMD
EVIFEEFKGTGNMELQLDRKLSNKRIFPAIDITASSTRRDDLLLDRDTLQRIWILRNHLA
DMNSLESMEFLQAQIRGTRSNEEFLVSMNS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatacacttgaattgaatgacaaattagtgtctgaattacgtcaaatggctaaa
gaactgggcattgccgaagcagacgagctgcgtaaggcccaactcattacccgcattgtt
gaacaagaaaaaatgatcgatgcggcccgcgcccaacgatctaccttagatagtaattac
ggtggcgcagaagctgccactgccgaaactcctgccgaagcacccgcagccgaagataaa
ccacgcaaaagaacacgtaccgttaaaggcaagaccgccgcaccggcccctgccccgacc
gcagaggaggtcggcgccgacctttttgcagctccggagcctgtggtacaggccgagacc
gcacaagccggtacaccaaatgatgtagaggctgtagaggccttgagtgagcaagccgcg
cctattgcacctgccgccctcactgagaacactactcctgccgcgcctgttgcacgtcct
caaaaatttgagcgcagacagaacgaccgcgacaacaataacaacaacaataatcagccg
aagcagaaccgcgaaaagaacgaccagaacgctaaaaaagaagagatcaaccttgacttt
gataacgtgatcgttaacgaaggcgtgctcgagatcatgcctgatggttacggcttcctg
cgttcttctgactataattacctgacctcgcccgatgatatctatgtatcacagtcgcag
atcaaactttttggcttaaaaacaggcgacaccgttcgtggtagcatacgcccgccaaaa
gagggtgaaaaatatttcccgctggtacgtgtagaggccattaatggccgtatacctgcc
gaggttcgtgatcgtgtgccatttgatcacttgaccccgcttttcccgtctgagcgtttg
aacctgttcactgatgccggtaactattctacccgtatcatggacctgttctcgccaata
ggtaaaggacaacgtggtttgatcgtggcccaacctaaaacaggtaagaccatgttatta
aaggacgtggctaacgccattgccaaaaatcaccctgaggtttacctgatcatcttactg
atcgatgaacgccccgaggaggttaccgatatggcccgcagcgtacgcgccgaggtggta
tcatcaacctttgatgagccggccgagcgccacgtcaagatcgctaacatcgttttagag
aaagctaaacgcatggtagagtgcggtcatgacgtagtgatcctgctcgactcgatcacc
cgtttggcccgtgcatataacaccgttgcacctgcctcaggtaagatcttatcgggtggt
gtggatgctaacgccctgcacaagcctaagcgcttttttggtgcggcccgtaacattgag
gatggcggctcgcttaccattatcgctaccgcactgaccgagaccggctctaaaatggac
gaggtgatattcgaagagttcaagggtaccggtaacatggagttacaattggatcgcaaa
ctctcgaacaaacgtatattcccggctatcgatatcactgcttcaagcacccgtcgcgac
gacctattattggatcgcgacaccttgcaacgcatctggatcctgcgcaaccacctggcc
gacatgaactcattggaatcaatggagttcttgcaagcacagatccgtggtacccgctca
aacgaggaattcctggtatcgatgaactcataa
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