Mucilaginibacter daejeonensis: LLH06_17765
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Entry
LLH06_17765 CDS
T07909
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mdj
Mucilaginibacter daejeonensis
Pathway
mdj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LLH06_17765 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdj03400
]
LLH06_17765 (uvrA)
DNA repair and recombination proteins [BR:
mdj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LLH06_17765 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LLH06_17765 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_15
nSTAND3
AAA_23
TraI_2B
PRK
Viral_helicase1
DUF1216
Motif
Other DBs
NCBI-ProteinID:
UEG52796
LinkDB
All DBs
Position
complement(4105629..4108472)
Genome browser
AA seq
947 aa
AA seq
DB search
MAEKTIDLGEQSEVEVYGARVHNLKNIDVSFPRNQLVVITGLSGSGKSSLAFDTIYAEGQ
RRYMETFSAYSRQFMGGMERPDVDKVSGLSPVIAIEQKTTSKNPRSTVGTITEIYDFMRL
LFARAGEAYSYISGQKMERMSEDQILRTITEKFDGQPVNILAPVVKGRKGHYRELFEQIR
KQGYLKVYVDGQIMDVEPKMQLDRYKIHDIDIVVDRLVVTEKDGKRLYTSVQSALKTAKG
IIRIADKDNNVSYFSKFLMDPVSGISYDEPQPNTFSFNSPYGACEKCDGLGYIFVVDEAS
VIPDPKLSIMNGGLAPLGEYRDTWTFQVLKALAKKYEFSLSVPIEKIPREKLDIILNGSN
EIISVAVEYNKWNVENYQVTFDGIIRMLEEQQERKSEGVSDDLESYRTLKVCPVCEGARL
KKESLNFKVDGKNIFELATMDIRTLQEWFVGVEDRLNERQNVIAREILKEIRARIGFLLD
VGLSYLTLDRTARTLSGGEAQRIRLATQIGSQLMNVMYILDEPSIGLHQRDNDRLIRALK
DLRDLGNTVLVVEHDKDMILEADYVIDMGPSAGVHGGTVVAQGTPQELMSVNTLTTSYIN
GTKEIEVPKKRRKGNGKSLTLKKATGHNLKKVTVEFPLGKLIGITGVSGSGKSSLITETL
YPILNHHFFRAKKTPLPYDKIEGLEHIDKVIEIDQTPIGRTPRSNPATYTGVFSDIRALY
VQLPESKIRGYKPGRFSFNVKGGRCETCQGAGQKVIEMNFLPDVQVPCEECGGKRYNRET
LEVRYRGKSISDVLDMSIEDATAFFEHIPAIYRKVRTLNDVGLGYITLGQSSLTLSGGEA
QRVKLATELSKKDTGNTFYILDEPTTGLHFEDINVLLGVLQQLVDKGNTVLVIEHNLDVI
KVVDHVIDLGPEGGSGGGTIMYKGTPEGLCKVKESFTGVFLAKEMKL
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaacgatcgacctgggcgaacaaagcgaagtggaggtgtacggtgcccgg
gtacataacttaaaaaatatcgatgtttcttttccgcgcaaccagctggtggtgatcacc
gggctgagtggaagcggtaaatcgtcattagcttttgatacgatatatgccgaaggacag
cgccgttacatggaaacgttctcggcctactcaaggcagttcatgggtggtatggaacgc
cccgatgtggataaggtatcgggcctgagcccggtgatcgccattgagcaaaagaccacc
agcaagaacccgcgcagtaccgtgggcaccattaccgagatatacgatttcatgcgtttg
ctatttgcccgcgcaggtgaggcttactcgtacatcagcggtcaaaaaatggagcgcatg
agcgaggaccagatcctgcgcaccatcaccgagaaatttgatgggcagccggtgaatata
ctggcgccggtagtgaagggccgtaaaggtcactatcgcgaattgttcgagcagatccgc
aagcaaggctaccttaaggtatatgtggatggccagatcatggacgttgagcccaagatg
cagctggaccgttacaagatccacgatatcgacattgtggtggaccgcttggtggtgacc
gaaaaggatggcaaacgtttatatacttcagtgcaatcggccctcaaaacggccaaaggc
atcatccgtatagccgacaaggacaataatgtatcctacttcagcaagttcctgatggac
ccggtatcgggcatctcgtatgacgagcctcagcccaataccttttcctttaactcgccg
tatggcgcctgcgaaaagtgcgatgggcttggttacatcttcgtggtggatgaagcatcg
gtgatacccgaccctaagctgagcatcatgaacggtggcctggcgccgctgggtgagtac
cgcgatacgtggaccttccaggtgctgaaagcgctggccaaaaaatatgagttctcgttg
tcggtacccatcgagaagataccgcgtgaaaagctggacatcattttgaatggctcgaac
gagatcatcagcgtggcggtagagtacaacaaatggaacgtagagaattaccaggtgacc
ttcgatggcattatccgcatgctggaagaacagcaggaacgtaaaagcgaaggcgtgagc
gacgacctggaaagctaccgcaccttaaaggtatgcccggtatgtgaaggcgcccgctta
aaaaaggaatcattgaactttaaggtggatggcaagaacatcttcgagctggccaccatg
gacatccgcaccttgcaggagtggttcgttggggtggaggaccgcttgaacgagcgccag
aacgtgatcgcccgcgagatattaaaagagatacgcgcccgcattggctttttgcttgat
gtaggattgagctatttgacgctcgaccgtaccgcacgtacgctatcaggtggtgaggcg
caacgtatacgcctggccacgcagatcggctcgcagctcatgaacgtgatgtacattttg
gatgagcccagcatcggcctgcaccaacgtgataatgaccggctgatccgtgccctgaag
gatctgcgtgatctgggtaacacggtgttggtggtggagcatgataaggacatgatcctg
gaggccgactacgtgatcgacatggggccgtctgctggtgtgcatggcggtaccgtagta
gcacagggtacccctcaagagctgatgagcgtgaacacgctgaccacttcatacatcaat
ggcactaaagagatagaggtgcccaaaaagcgccgcaagggcaacggcaaatcgttgaca
ctgaaaaaggccaccggccataacctcaaaaaggtgaccgtggagttcccgctcggcaaa
ctgatcggtatcacgggtgtatccggtagtggtaaatcgagcctgatcaccgagaccttg
tacccgatcttgaatcatcacttctttcgcgctaaaaaaacaccgctcccttatgataag
atcgaggggctggaacatatagataaggtgatcgagatcgatcaaacgccgatcggtcgt
acaccgcgatctaacccggccacttacaccggcgtattcagcgatatacgggcgttgtac
gtgcaactgccagagtcgaagatccgcggttacaagccaggccgtttctcgttcaacgta
aaaggtggccgctgcgagacctgccagggtgccggccaaaaggtgatcgaaatgaacttt
ttacccgatgtgcaggtgccttgcgaagagtgcggcggcaagcgctacaaccgcgaaacg
ctcgaagtacgctaccgtggaaaatccatcagtgatgtgctggacatgagcatcgaggat
gctacggctttctttgagcacatcccggccatttaccgtaaggtgagaacgctgaacgat
gtaggcttgggttatatcacgctgggccaatcgtcactaaccctgtcaggtggtgaggca
caacgcgtaaaactagctactgagctttcaaaaaaagatactggtaacactttctatata
ttggatgagccgaccaccggattgcacttcgaggatatcaacgtgctgctcggcgtactg
caacaactggtagacaaaggcaataccgtattggtgatcgagcacaaccttgacgtgatc
aaggtggtggatcatgtgatcgaccttggccccgaaggtggctcgggtggcggtacaatc
atgtataaaggtacaccagaaggattatgcaaagtcaaggaaagctttactggcgtattc
ctggctaaagagatgaaattgtag
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