Mucilaginibacter daejeonensis: LLH06_20600
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Entry
LLH06_20600 CDS
T07909
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mdj
Mucilaginibacter daejeonensis
Brite
KEGG Orthology (KO) [BR:
mdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdj03009
]
LLH06_20600 (rimO)
Enzymes [BR:
mdj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LLH06_20600 (rimO)
Ribosome biogenesis [BR:
mdj03009
]
Prokaryotic type
ribosomal protein modification factors
LLH06_20600 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UEG53341
LinkDB
All DBs
Position
complement(4774170..4775504)
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AA seq
444 aa
AA seq
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MNTKTIKKPLIMAKPRVNVVTLGCSKNIYDSEVLMGQLKGNQFDVVHEAGNVNSNDIVVI
NTCGFIDNAKQESIDTILQYSELKEQGKVGNVIVMGCLSERYKPELQAEIPNVDAYFGTN
ELQNVLQSIGANYKYELLGERLLTTPSHFAYFKIAEGCNRPCSFCAIPLMRGKHVSTPME
QLVDQAKSLAKQGTKELILIAQDLTYYGLDLYGKRNLDELMRRLSDVDGIEWIRLQYAYP
SGFPMEILDAMNERSNICKYLDMPLQHISDDMLKSMRRGTTKQKTIDLVNAIRDKVPNIA
MRTTLITGYPGETEADFNEMYDWVEETRFDRLGCFTYSHEEKTHAHTLVDDVPEEVKQDR
VDAIMELQQGISYEKNQEKIGQTFKVLIDKIDNGYITGRTEYDSPEVDNEVLIDATQQYA
TIGSFVNVKVDSAEDFDLYGQIVK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaagaccattaaaaagcccctgatcatggccaaaccccgcgttaacgtggtg
acccttggctgctccaaaaatatttacgactctgaggtactgatgggccagctcaaaggc
aaccaatttgacgtggtgcacgaggccggcaacgtgaacagtaatgatatcgtggtgatc
aatacctgcggctttatcgataacgccaagcaggaatccatcgataccatattgcagtac
agcgagctgaaggagcagggcaaggtgggcaatgtgatcgtgatgggctgcctgtctgaa
cgctacaaacccgaattgcaggccgagatacctaacgttgacgcttactttggcactaac
gagttgcagaacgtgctgcaaagcatcggcgccaattataaatacgaattactgggcgag
cgtttgctcaccaccccatcgcactttgcatacttcaagatcgccgagggctgtaaccgc
ccctgctcattttgcgccataccgctcatgcggggcaaacacgtgagcacgcctatggag
cagctggtggatcaggccaaaagcctggccaaacagggcaccaaggagctgatcctgatc
gcgcaggatcttacctactacgggttggatctgtatggcaaacgtaaccttgacgagctg
atgcgccgcctgagcgatgtggacggcatcgaatggatccgcttgcagtatgcctaccct
tcgggtttcccgatggagatactggacgccatgaacgagcgcagcaacatttgcaaatac
ctcgatatgccgttgcagcacatcagcgatgatatgctcaaatcgatgcgccgtggtacc
accaagcaaaagaccattgacctggtgaacgccatacgcgataaggtgcctaacattgcc
atgcgtaccacgctgatcaccggttacccgggcgagaccgaggccgactttaacgagatg
tatgactgggtggaagagacccgctttgatcgtttgggctgcttcacttactcgcacgag
gaaaagacccacgcgcatacgcttgttgatgatgtgcccgaggaagtgaaacaggaccgc
gtggatgccattatggaactgcagcagggcatatcgtacgaaaagaaccaggaaaagatc
ggccagacgttcaaggtactgatcgataagatcgataacgggtacattaccggccgtacc
gaatatgactcgcccgaggtggataacgaggttttgatcgatgctacccaacaatatgcc
accattggcagttttgtgaacgtaaaggtagatagcgccgaggactttgacctttatgga
cagatcgtaaaataa
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