Microplitis demolitor: 103569252
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Entry
103569252 CDS
T05600
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
mdl
Microplitis demolitor
Pathway
mdl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103569252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdl03021
]
103569252
03019 Messenger RNA biogenesis [BR:
mdl03019
]
103569252
Transcription machinery [BR:
mdl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103569252
Messenger RNA biogenesis [BR:
mdl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103569252
U7-dependent histone pre-mRNA processing factors
103569252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_2
HisG_C
Cnd1
Motif
Other DBs
NCBI-GeneID:
103569252
NCBI-ProteinID:
XP_008544685
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MDPRLHRRPEPEKSSGEMIVEWLNEAAVSQNDQIKVGNLNKIQEYLINKDPQLMNIYLNE
VLQFCSDRNAEVRKTIAGFIEQAGDKTPEKIPQMLTPLLRLINDEVPAVSKRAVRASGRI
LRAALKWIVSSSSAVVTPEMETAWNQLSTLKVQIINMIDSDNDGIRTQAVKFLEGVVLLQ
THIDPDMPKKPGDFSLEDVPLTLKIARRRKLEEEANHVMDLLIKFHGSPHVSSVNLMTCM
GSLAQIAKMRPQFMTKVIEALQRLQGDLPPTLSDSQLTSVQKQLKTTLLALMKHPASIEH
VQTIVKQLTQLGAKEQDIMKAYPKPEEIRRMKKRQQEAAAAASAAKRAKLETIIPTIAVE
ESEPEPLPVITKPELIELSESFITERLSVEIATDLVLDSMTWVPDTMTAIFAREYQPSVS
PDLLDQRQAIAKLLAAQIKQAKAKKIKKDKDDDAVMEDLIKNPTISVAEAKRERKREKDR
EKEKEAKAVLEAEKTLAKRARIKVLKLAEVTKPLSRDTKEKMLLMAVNRILRAEKSAIFG
GVATVRSKILTTLAATFKPHIREAVLHYISDDIRTRLDLALSWLYEEYALLQGFQRRITL
STNPHEAPRQAYNFVLCTLVSAIEIIQGKDRDPLLARLYFEAPLITEDAVEALKSISCDE
SRGLAPLNLLKEMVIRRPTKQLVFLNVLLCHTGHEKSVIRDTSINLVVELYSRPDLSKLI
EEYAVLYLGFLRLPNPPEIVFGQDRGREKIEQHWTESTTRACLGLYLSLLEKHQDLIHEL
ARVYTSMAADVKRIVLRLVENPVRSLGMASPQLLALVENCPKGAETLITRIIHILTEKSA
PSAELVSRVRELYQTRVSDVRFLIPVLNGLTKKEVIAALPKLIKLNPIVVKEVFNRLLGT
HNNDTGIPHTSPLTPAELLIALHNIDSSKAELKTVIKTTSLCFAEKQVFTQETLAVVIQH
LMEINPLPTLLMRTVIQSLALYPRLSGFVMNILQRLILKQVWKQPKVWEGFVKCCERTQP
QSFAVILQLPPQQLSDAFKMAPGLREPLVSHIDQFADNQKAHISAAVMDVIHGKQIVDLH
DDFDIAPPGDFLPVEIKTELDGIADPSEPAPPGLD
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaggttacatcgcagacctgaacctgagaagagttctggtgaaatgatcgta
gagtggctgaatgaagcggcagtaagtcaaaatgatcagataaaggttggaaatcttaac
aaaatacaagagtatctgataaacaaagaccctcagctgatgaacatttacctcaatgag
gtactgcaattttgttcagaccgtaatgctgaagttagaaagacaatcgctgggttcatt
gaacaagccggtgataagacaccagagaaaattcctcagatgcttacacccctgctgcga
ttgataaacgacgaagtgcctgcggtatcaaaacgcgctgtccgggccagtggtcgtatt
ctgagagccgcattaaagtggatcgtcagcagcagctcggcagtagttactccggaaatg
gagaccgcatggaatcagctgagcactctgaaggttcaaataataaatatgattgatagt
gacaatgatggaattcgcacgcaggctgttaagttcctcgaaggcgtggttctgctccag
acccacattgatcctgatatgccaaagaaaccgggtgatttttctctggaagacgtgccg
ttgactctgaaaatagcgcgtcgacgtaaacttgaggaggaggctaatcatgtgatggat
ttgctgataaagttccacgggtcgccgcacgtaagtagcgttaatttgatgacatgcatg
ggaagtctcgcgcagatagcgaaaatgcgcccgcagtttatgacaaaagttattgaagcg
ctgcagcgtctccaaggagatttgccaccgactctgtcggactctcagcttactagtgta
cagaagcagctcaagacaactctgctggctttgatgaagcacccagccagtattgagcat
gtgcagactattgtcaagcagttgacgcagttgggagccaaggaacaagacatcatgaag
gcttacccgaagccagaagagatccgtagaatgaaaaagcgtcagcaggaagccgcagct
gctgccagtgctgccaagcgcgcgaaattggagacgataataccgacaatcgccgtcgag
gagtcggaacctgaacctctcccggtgataactaagcctgagttgattgaattgtccgag
agcttcatcactgaacggctgagcgtcgagatagcaactgatctagttttggacagcatg
acctgggtcccagacacgatgactgcgatatttgcacgggagtatcagccgagtgtgtct
ccggacttgttggatcagcgacaagcgatcgctaagctactggcggcccaaataaaacag
gcgaaggctaagaaaataaagaaggacaaggacgatgacgcggtgatggaagacttgatc
aagaatcccactatttctgtggctgaagccaagcgcgaacggaagcgagagaaggatcgt
gaaaaggagaaggaagccaaggcggtgctggaagctgagaagactctcgcaaagcgggca
cggattaaagtactgaagcttgcggaggttaccaagccgttgtcgagagacaccaaggaa
aaaatgcttctgatggctgtcaatcggatcctacgtgccgagaagagtgcaatctttggt
ggagttgctacagtgcgttcgaaaattctgacaactcttgctgcgactttcaaaccgcac
atcagagaagccgtcttgcattatatttcggatgatataagaacgcggctggatctcgcg
ttaagttggttgtacgaggagtacgcgttgcttcaaggctttcaaagacgtattacactc
agcacaaatccccatgaagcaccacgacaagcttataatttcgtcctctgcactttggta
tcagctatcgagataattcaaggcaaggatcgcgacccgctgcttgcaaggctttatttt
gaagcccctttgattacagaggacgccgtcgaagcgctcaagagcatttcatgcgacgaa
tcacgtggtctcgctccgcttaatctcctcaaagagatggtgatccgaagacctaccaag
caactggtctttctgaatgtcctgctttgtcatactggtcacgagaaatcggtgatacgc
gatacatctataaatctggtcgtcgaactctacagccgtcctgacctaagtaaactaata
gaagagtacgcagttctctatctgggattcctcaggctgccgaacccaccggagatcgtt
ttcggacaggaccgcggtcgcgagaaaattgagcagcactggactgagtcgactactcgc
gcctgtttgggactttatttatcgctgctagaaaaacatcaagacttgatccatgaactg
gctcgggtctacacctcgatggctgctgatgtcaaacgaatagtcttaagacttgtagag
aatcccgtgcgctcactgggaatggcgagtccccagctgctcgcacttgttgaaaactgt
cctaagggcgcagagactctgatcactcgtatcattcacatcttgactgaaaagtctgca
ccaagtgctgaattggtctcgcgagtacgtgagctctaccagacccgagtctcagacgtc
cggtttttgatccccgttttgaatggacttacaaagaaggaagtaattgctgcgctgcct
aagctcatcaagctgaacccgatcgtcgtcaaggaagtcttcaaccggctcctgggtact
cacaataatgacaccgggataccgcacacgtcgccgctgactccagccgagctactaatc
gccttgcacaatatcgactccagcaaagccgagttgaagacagtaataaaaactacgtct
ctgtgcttcgccgagaagcaggtctttacccaggagacactggcggtcgtgatccagcat
ctgatggagataaacccgttacccacgttgctgatgcgaactgtcatacagagtctcgct
ctctacccgagactcagtggattcgtcatgaatatcttacagagactgatcctcaagcag
gtctggaagcagccgaaagtctgggaaggattcgtcaagtgctgcgagcgcactcagcct
caaagtttcgcggtaattcttcagcttccgccccagcagctctcagacgctttcaagatg
gctccgggtctcagggagcctcttgtcagtcacattgaccagtttgctgacaatcagaag
gcccacatatctgctgccgtcatggacgtaattcacggcaaacaaatcgttgacttgcac
gacgacttcgacatcgcgccaccaggagattttcttcctgtcgaaataaaaacggaactc
gacggtatcgctgatccctcagaaccagcgcctccgggcttagattaa
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integrated database retrieval system
