Microplitis demolitor: 103571009
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Entry
103571009 CDS
T05600
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mdl
Microplitis demolitor
Pathway
mdl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103571009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdl03019
]
103571009
03041 Spliceosome [BR:
mdl03041
]
103571009
Messenger RNA biogenesis [BR:
mdl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103571009
Spliceosome [BR:
mdl03041
]
Complex B
Other components
Prp19-related factors
103571009
Complex C
103571009
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_15
TPR_8
TPR_12
NRDE-2
ARM_TT21_C
PPR
TPR_10
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
103571009
NCBI-ProteinID:
XP_008547181
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MKRKVDFDGNVYVFNDEDLPYEEEILRNPYSVKHWLRYIDHLKTTKSPNLNIVYERSLKE
LPGSYKLWYGYLCHRVSQLKDRRLDDPLYDDVNNAYERALIFMHKMPRVWIDYCTLMTEQ
CFITRTRHIFDRALRALPITQHHRVWPLYLEFVKSHDIPETGIRVFRRYLKLAPEDTEDY
IEYLISIDRLDESAVKLAHIVNQDDFVSKHGKSNHQLWNELCDLISKNPRKIKSLKVDPI
IRGGLRRYTDQVGSLWNSLADYYIRSGLFERARDIYEEAIQTVSTVRDFTQVFDAYSQFE
EIATKKRIEEINNNPNRTEDDEVELDLRLARFEYLIERRPLLLNSVLLRQNPHNVPEWHK
RVKLYEGQPHEIINTFTEAVQTVKPQLAVGKLHTLWVAFAKFYEENGQIPDARVVFEKAT
HVPYTKVDDLASVWCEWAEMEIRHNFCIEALKLMHRATAMPSRKVGYYDESETVQMRLYK
SLKVWSMYADLEESFGTFKTCKAVYDNIIDLKIATPQIIINYGMFLEENNYYEEAFRAYE
KGIALFKWPNVFDIWNTYLTKFLDRYKGTKLERTRDLFEQCLEHCPPKYAKVFYLLYAKL
EEEHGLARHAMNVYERSIKAVPNEEKFELFNIYIKKAAEIYGVPKTREIYAEAIEVLSDE
NSREMSLRFAEMETKLGEVDRARAIYVHCSEICDPRVTSRFWQIWKEFEVRHGNEDTMRE
MLRIKRSVQAMYNTQINMMTAQMLNSTVPQTETTVDAMRLLDIKAAGAGGGAAEGNAPAA
PRGTISFVRGVTEGGKDDGRVKNPDEIDIDMDEDDDDADEEIEEEEVPVEKQIIPSEVFG
GLKPVDNEEDD
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaaagtagattttgacgggaacgtttacgtattcaatgatgaagatttgccg
tatgaagaggagattcttcgcaacccatattcagtaaaacactggctgcgatatattgat
catttgaaaacaaccaagagcccaaatttaaatatcgtatacgaacgttcactgaaagaa
cttcctggtagttacaaactgtggtatgggtatctgtgtcaccgggtgagtcaactaaag
gatcgtcgacttgatgatcctctttacgatgatgtcaataatgcgtacgaacgcgcgctg
atttttatgcacaaaatgcctcgtgtctggatcgactactgcacgttgatgaccgagcag
tgcttcatcaccaggacaagacacatttttgatcgcgcgctcagagcattgcccatcacg
cagcaccaccgggtatggccgctgtacctggagttcgtcaagagtcacgacattcctgag
accggtatcagagttttccggcgatatttaaagctggcgcccgaagacactgaggattac
attgagtatttaatttctatcgaccgtctggatgagtctgcagtcaaactcgctcatatt
gtcaaccaggatgacttcgtttcaaagcacgggaagtcaaaccatcaattgtggaacgaa
ctctgcgatttaatttccaagaaccccaggaaaataaaatcattgaaagttgatccgatt
atcagaggaggtctccggaggtacacagatcaggtgggatcactttggaattctctggcc
gattattatattcgcagtggtctgttcgagagagctagagatatctacgaggaggcgatt
caaactgtgtctactgtcagagattttactcaggtgttcgatgcgtattcgcaattcgaa
gagatcgctaccaagaagcgcatcgaggaaattaacaacaatcccaatagaactgaagac
gatgaagtggaactggacctacggctagcgaggtttgaatatcttatagaacggagacct
ttgctgctgaactcagtcctgctgagacagaacccacacaacgttcccgagtggcacaag
cgagtgaaactctacgaaggacaaccgcatgaaataattaatactttcacagaagctgtt
caaaccgtaaagcctcagttggctgtcgggaaactccacaccctctgggtggcattcgct
aaattctacgaggagaacgggcagatacccgatgcgcgggtggtctttgaaaaagcgacc
cacgttccctatactaaagttgatgacttggcttcagtttggtgcgagtgggccgagatg
gagatccgtcataacttctgcatagaagctctcaagctgatgcatcgtgcaactgcaatg
ccatcaagaaaagtcgggtattatgatgaatccgagaccgtgcaaatgagattatacaag
tcactgaaggtctggtcgatgtacgctgacctagaagagagctttggaacttttaaaact
tgcaaagctgtctatgacaacataattgatttgaaaatagcaacaccccagattatcatc
aactatggaatgtttttggaggagaataattactatgaagaagcattcagagcctatgag
aaaggtatcgctctgtttaagtggccgaatgtcttcgacatctggaatacatatttgacg
aaattcttggacagatacaaaggaactaagctggagaggactcgcgatctcttcgagcag
tgtctagaacattgtcctccaaaatacgccaaagtattttatttgctgtacgcaaaactg
gaggaagagcatggacttgcccggcatgcgatgaatgtctacgagcgctctatcaaggct
gtgcccaatgaagaaaaattcgagctgttcaatatctatataaagaaagctgctgaaatc
tacggcgtgcctaagacgagagaaatttacgcagaagctattgaggttctcagtgacgag
aactcgcgtgaaatgtccctgaggttcgctgaaatggagactaagttgggcgaagtggat
cgcgctcgtgcgatttacgttcactgcagcgaaatttgcgacccgagagtgacctcgagg
ttctggcagatctggaaagagttcgaagtccgtcacggtaatgaggacacgatgcgcgag
atgttgagaattaagagaagtgtccaggcgatgtacaacacgcagatcaatatgatgaca
gcacaaatgctcaatagcacggtgccgcagactgaaaccaccgtggatgccatgaggctg
ttggatatcaaagctgctggtgctggtggtggtgctgctgaagggaatgctccagctgcg
cccagaggaacgatcagtttcgtccggggagtcactgaaggaggaaaagatgacgggaga
gttaaaaatcctgacgagattgatattgatatggatgaggatgacgatgatgctgatgaa
gaaatagaagaggaagaagttccggttgagaagcagatcattccttcagaagtatttggg
ggattgaagcctgtagataatgaagaagacgattaa
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