Microplitis demolitor: 103572064
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Entry
103572064 CDS
T05600
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like domain-containing protein 1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
mdl
Microplitis demolitor
Pathway
mdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103572064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdl03019
]
103572064
Enzymes [BR:
mdl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
103572064
Messenger RNA biogenesis [BR:
mdl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
103572064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DUF4897
Motif
Other DBs
NCBI-GeneID:
103572064
NCBI-ProteinID:
XP_014300721
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MNEILDNNFINNYDKIKLSLKNATFIAIDAEFSGIKEENVADLSLFDTMPQRYKKLRENI
NSFIAIQLGISTFKYIRDDNKYNVDTYNFYLLPRQLPFDDRQFLWQVGALEFLTRHNFNF
NKLNYHGISYLDEEKEIKLRDTLKVNDYINNYAIFSNSNDESVFSTAISDVAKWLKDSKS
ERSIELKCNNIAQQCYIQRELRSSFKSIWTESKDQLSILVIKVDAQTREALEEVDNNSLE
NKIIDYYLGFTKVFKLLVDLKKPIIGHNALLDLMFIYKQFYRPLPSNYLDFKKEIHKIFP
CIYDTKFISYELKRKLDTDSLKSNILQELYHFFISAGHILVIDSPKIEFSEPVNSDKEIY
HDAGWDSYYSGYCFIKTAYVHAIKKRGLRDGLIELTNSEIFYGVHEYVNCVNVIRADLSY
IKLDGPDPKSTRPPWLNIRTKKIYPINKLDGPDPKSTRPPWLNIRTKKIYPINISEISEE
LSPFGSLAIKPHTRESVLVATSNYRTAREILDHFQRSKDYRVALYNPLRHSLISKSIIWS
GFVLTSGLLTWLIHSRITRS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaatattagataacaattttataaataattatgataaaattaaattgtcatta
aaaaatgccacttttattgcaattgatgccgaatttagtggaattaaagaagaaaatgtt
gcagatttatcattatttgatacgatgccacagcgttacaaaaaattgcgtgaaaacatc
aattcgtttatcgcaatccaattaggaataagtacatttaaatatataagagacgacaat
aagtataatgtcgacacgtataatttttatttattaccgagacaattgccttttgatgac
agacaatttttgtggcaagttggagcacttgagtttctaacgagacataattttaatttt
aacaagctaaattaccacgggatatcgtacctagatgaggagaaggaaataaaactccgg
gacacattgaaagtaaatgattatataaataattacgcaatattttcaaatagcaatgac
gagtcggtattttctacggcgataagtgatgtggcgaaatggctgaaagactctaaatct
gagaggtctattgaattgaaatgtaacaacatcgcgcagcagtgctacatccagcgagag
ctgaggtcgtcattcaaatccatatggactgagtcgaaagaccagctgagtattttggta
attaaagtggatgctcagactagagaagctctagaggaagttgataataatagtttggag
aacaagattatcgattactatttagggttcaccaaagtcttcaagttgctggtcgacttg
aagaaacccattattgggcataatgccctacttgatctcatgtttatttataaacaattt
tatcggccgttgcctagcaattatttggattttaaaaaggaaattcacaaaatttttccg
tgtatttatgataccaagtttattagctatgagttgaagaggaaattagatacagattcc
ctgaagtcaaatatactccaagaactgtatcatttcttcatcagcgctggacacatacta
gtgatagactccccgaaaatcgaattctcagagccagtaaattcagacaaggaaatatat
cacgatgcgggctgggattcctattacagtgggtactgttttataaaaacagcttacgta
cacgcgattaaaaaacgcggactccgtgatgggttaatagaactgaccaactcggaaatt
ttttatggagtccacgagtacgttaattgcgttaatgtcattcgcgccgacctttcttac
atcaaattagacggtccagatcctaaatcaacgcggcctccttggcttaatatccgcact
aaaaaaatatacccaataaataaattagacggtccagatcctaaatcaacgcggcctcct
tggcttaatatccgcactaaaaaaatatacccaataaatataagcgagatctccgaagaa
ctttcaccgtttggatctctggcaataaaacctcacaccagagaaagtgttttggtagcg
acgtcaaattaccgaacggcgagagaaattctggatcatttccagcggagcaaagattac
cgcgtcgctctctataatccactgagacattcattaatatcaaaatcaattatatggagc
ggcttcgtcctgaccagcggcttactgacctggttaatccactccaggatcactagatct
taa
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